ArticleScientific reports2016
Expansion and stress responses of AP2/EREBP superfamily in Brachypodium distachyon.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
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37 citing papers in PubMed, 89 citations in OpenAlex.
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- Characterization and Role of AP2/EREBP Genes with Decreasing Expression During Leaf Development in 84K Poplar.Plants (Basel, Switzerland) · 2025Article
- Phylogenomic Analysis and Functional Characterization of the APETALA2/Ethylene-Responsive Factor Transcription Factor Across Solanaceae.International journal of molecular sciences · 2024Article
- Integration analysis of miRNA-mRNA pairs between two contrasting genotypes reveals the molecular mechanism of jujube (Ziziphus jujuba Mill.) response to high-temperature stress.BMC plant biology · 2024Article
- The Brachypodium distachyon DREB transcription factor BdDREB-39 confers oxidative stress tolerance in transgenic tobacco.Plant cell reports · 2024Article
- Genome-wide identification and evolutionary analysis of the AP2/EREBP, COX and LTP genes in Zea mays L. under drought stress.Scientific reports · 2024Article
- Reference genes for Eucalyptus spp. under Beauveria bassiana inoculation and subsequently infestation by the galling wasp Leptocybe invasa.Scientific reports · 2024Article
- Combined Transcriptome and Proteome Analysis Provides Insights into Petaloidy in Pomegranate.Plants (Basel, Switzerland) · 2023Article
- Genome-wide identification of theFrontiers in genetics · 2023Article
- Transcriptomic analysis of Amaranthus retroflex resistant to PPO-inhibitory herbicides.PloS one · 2023Article
- Patterns of pan-genome occupancy and gene coexpression under water-deficit in Brachypodium distachyon.Molecular ecology · 2022Article
- Transcriptome-based gene regulatory network analyses of differential cold tolerance of two tobacco cultivars.BMC plant biology · 2022Article
- Genome wide association study of frost tolerance in wheat.Scientific reports · 2022Article
- Transcriptome-based identification and expression profiling of AP2/ERF members in Caragana intermedia and functional analysis of CiDREB3.Molecular biology reports · 2021Article
- Identification and Expression Profiling of Nonphosphorus Glycerolipid Synthase Genes in Response to Abiotic Stresses inPlants (Basel, Switzerland) · 2021Article
- Article
- Expansion and Molecular Characterization of AP2/ERF Gene Family in Wheat (Frontiers in genetics · 2021Article
- TheGenes · 2020Article
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Authors and funding
11 authors at 5 institutions in 2 countries.
Funding
Abstract
APETALA2/ethylene-responsive element binding protein (AP2/EREBP) transcription factors constitute one of the largest and most conserved gene families in plant, and play essential roles in growth, development and stress response. Except a few members, the AP2/EREBP family has not been characterized in Brachypodium distachyon, a model plant of Poaceae. We performed a genome-wide study of this family in B. distachyon by phylogenetic analyses, transactivation assays and transcript profiling. A total of 149 AP2/EREBP genes were identified and divided into four subfamilies, i.e., ERF (ethylene responsive factor), DREB (dehydration responsive element binding gene), RAV (related to ABI3/VP) and AP2. Tandem duplication was a major force in expanding B. distachyon AP2/EREBP (BdAP2/EREBP) family. Despite a significant expansion, genomic organizations of BdAP2/EREBPs were monotonous as the majority of them, except those of AP2 subfamily, had no intron. An analysis of transcription activities of several closely related and duplicated BdDREB genes showed their functional divergence and redundancy in evolution. The expression of BdAP2/EREBPs in different tissues and the expression of DREB/ERF subfamilies in B. distachyon, wheat and rice under abiotic stresses were investigated by next-generation sequencing and microarray profiling. Our results are valuable for further function analysis of stress tolerant AP2/EREBP genes in B. distachyon.
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