ArticleMethods in molecular biology (Clifton, N.J.)2016
Methods for SWATH™: Data Independent Acquisition on TripleTOF Mass Spectrometers.
Article in Methods in molecular biology (Clifton, N.J.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
What it found
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Who cites it
20 citing papers in PubMed.
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- Osteopontin depletion in macrophages perturbs proteostasisFrontiers in immunology · 2023Article
- Answer ALS, a large-scale resource for sporadic and familial ALS combining clinical and multi-omics data from induced pluripotent cell lines.Nature neuroscience · 2022Article
- Data-Independent Acquisition Mass Spectrometry-Based Deep Proteome Analysis for Hydrophobic Proteins from Dried Blood Spots Enriched by Sodium Carbonate Precipitation.Methods in molecular biology (Clifton, N.J.) · 2022Article
- Proteomic Analysis of Human Neural Stem Cell Differentiation by SWATH-MS.Methods in molecular biology (Clifton, N.J.) · 2022Article
- An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients.iScience · 2021Article
- Discovery of Screening Biomarkers for Major Depressive Disorder in Remission by Proteomic Approach.Diagnostics (Basel, Switzerland) · 2021Article
- Mass Spectrometry-Based Shotgun Lipidomics for Cancer Research.Advances in experimental medicine and biology · 2021Article
- SWATH-MS Protocols in Human Diseases.Methods in molecular biology (Clifton, N.J.) · 2021Article
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- Development of a Gill Assay Library for Ecological Proteomics of Threespine Sticklebacks (Molecular & cellular proteomics : MCP · 2018Article
- Multiplex Biomarker Screening Assay for Urinary Extracellular Vesicles Study: A Targeted Label-Free Proteomic Approach.Scientific reports · 2018Article
- Mapping Biological Networks from Quantitative Data-Independent Acquisition Mass Spectrometry: Data to Knowledge Pipelines.Methods in molecular biology (Clifton, N.J.) · 2017Article
- The Cohesive Metastasis Phenotype in Human Prostate Cancer.Biochimica et biophysica acta · 2016Review
- Regulation of highly homologous major urinary proteins in house mice quantified with label-free proteomic methods.Molecular bioSystems · 2016Article
- Monoacylglycerol Analysis Using MS/MS(ALL) Quadruple Time of Flight Mass Spectrometry.Metabolites · 2016Article
- Application of volumetric absorptive microsampling for robust, high-throughput mass spectrometric quantification of circulating protein biomarkers.Clinical mass spectrometry (Del Mar, Calif.)Article
Corrections and comments
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Authors and funding
5 authors.
Funding
Abstract
Data independent acquisition (DIA also termed SWATH) is an emerging technology in the field of mass spectrometry based proteomics. Although the concept of DIA has been around for over a decade, the recent advancements, in particular the speed of acquisition, of mass analyzers have pushed the technique into the spotlight and allowed for high-quality DIA data to be routinely acquired by proteomics labs. In this chapter we will discuss the protocols used for DIA acquisition using the Sciex TripleTOF mass spectrometers and data analysis using the Sciex processing software.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.