Evidence map›Paper›PMID 26867576›Full record

ArticleThe Journal of biological chemistry2016

Exploration of the Peptide Recognition of an Amiloride-sensitive FMRFamide Peptide-gated Sodium Channel.

You-Ya Niu, Yang Yang, Yan Liu, Li-Dong Huang, Xiao-Na Yang, Ying-Zhe Fan, Xiao-Yang Cheng, Peng Cao, You-Min Hu, Lingyong Li and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. A conserved peptide-binding pocket in HyNaC/ASIC ion channels.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Structural basis for excitatory neuropeptide signaling.Nature structural & molecular biology · 2024
    Article
  3. Article
  4. Aromatic amino acids in the finger domain of the FMRFamide-gated NaPflugers Archiv : European journal of physiology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

You-Ya NiuFrom the College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China, Institute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Yang YangInstitute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Yan LiuInstitute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Li-Dong HuangInstitute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Xiao-Na YangFrom the College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China, Institute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Ying-Zhe FanPutuo District Center Hospital, Shanghai University of Chinese Traditional Medicine, Shanghai, 200062, China.
Xiao-Yang ChengInstitute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Peng CaoHospital of Integrated Traditional Chinese and Western Medicine, Nanjing University of Chinese Medicine, Nanjing 210023, China, and Laboratory of Cellular and Molecular Biology, Jiangsu Province Academy of Traditional Chinese Medicine, Nanjing 210028, China.
You-Min HuInstitute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China.
Lingyong LiDepartment of Anesthesiology and Perioperative Medicine, University of Texas M.D. Anderson Cancer Center, Houston, Texas 77030.
Xiang-Yang LuFrom the College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
Yun TianFrom the College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China, tianyun79616@163.com.
Ye YuFrom the College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China, Institute of Medical Sciences and Departments of Pharmacology and Physiology, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China, yuye@shsmu.edu.cn.
Shanghai Jiao Tong University · CNHunan Agricultural University · CNJiangsu Provincial Academy of Traditional Chinese Medicine · CNShanghai University of Traditional Chinese Medicine · CNThe University of Texas MD Anderson Cancer Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

FMRFamide (Phe-Met-Arg-Phe-NH2)-activated sodium channel (FaNaC) is an amiloride-sensitive sodium channel activated by endogenous tetrapeptide in invertebrates, and belongs to the epithelial sodium channel/degenerin (ENaC/DEG) superfamily. The ENaC/DEG superfamily differs markedly in its means of activation, such as spontaneously opening or gating by mechanical stimuli or tissue acidosis. Recently, it has been observed that a number of ENaC/DEG channels can be activated by small molecules or peptides, indicating that the ligand-gating may be an important feature of this superfamily. The peptide ligand control of the channel gating might be an ancient ligand-gating feature in this superfamily. Therefore, studying the peptide recognition of FaNaC channels would advance our understanding of the ligand-gating properties of this superfamily of ion channels. Here we demonstrate that Tyr-131, Asn-134, Asp-154, and Ile-160, located in the putative upper finger domain ofHelix aspersaFaNaC (HaFaNaC) channels, are key residues for peptide recognition of this ion channel. Two HaFaNaC specific-insertion motifs among the ENaC/DEG superfamily, residing at the putative α4-α5 linker of the upper thumb domain and the α6-α7 linker of the upper knuckle domain, are also essential for the peptide recognition of HaFaNaC channels. Chemical modifications and double mutant cycle analysis further indicated that those two specific inserts and key residues in the upper finger domain together participate in peptide recognition of HaFaNaC channels. This ligand recognition site is distinct from that of acid-sensing ion channels (ASICs) by a longer distance between the recognition site and the channel gate, carrying useful information about the ligand gating and the evolution of the trimeric ENaC/DEG superfamily of ion channels.

Indexed as

AnimalsCHO CellsCricetinaeCricetulusHEK293 CellsHumansIon Channel GatingPeptidesProtein Structure, TertiarySodium ChannelsFaNaCh protein, Helix aspersaPeptidesSodium Channelschannel gatingepithelial sodium channel (ENaC)FaNaC channelsFMRFamide (Phe-Met-Arg-Phe-NH2) peptidesion channelligand-binding proteinligand-recognitionneuropeptidepeptide interaction

Identifiers

PMID26867576
PMCPMC4817185
OpenAlexW2265839167

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.