Evidence map›Paper›PMID 26867193›Full record

ArticleInternational journal of molecular sciences2016

Identification of Novel Pathways in Plant Lectin-Induced Cancer Cell Apoptosis.

Zheng Shi, Rong Sun, Tian Yu, Rong Liu, Li-Jia Cheng, Jin-Ku Bao, Liang Zou, Yong Tang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Zheng ShiSchool of Basic Medical & Nursing School, Chengdu University, Chengdu 610106, China. drshiz1002@hotmail.com.
Rong SunSchool of Life Sciences and Key Laboratory of Bio-resources, Ministry of Education, Sichuan University, Chengdu 610064, China. sunrong198982@163.com.
Tian YuSchool of Basic Medical & Nursing School, Chengdu University, Chengdu 610106, China. yutian@edu.cn.
Rong LiuSchool of Basic Medical & Nursing School, Chengdu University, Chengdu 610106, China. liurongscu@126.com.
Li-Jia ChengSchool of Basic Medical & Nursing School, Chengdu University, Chengdu 610106, China. chenglijia007@hotmail.com.
Jin-Ku BaoSchool of Life Sciences and Key Laboratory of Bio-resources, Ministry of Education, Sichuan University, Chengdu 610064, China. baojinku@scu.edu.cn.
Liang ZouSchool of Basic Medical & Nursing School, Chengdu University, Chengdu 610106, China. zouliang@cdu.edu.cn.
Yong TangSchool of Acupuncture and Tuina, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China. tangyong@cdutcm.edu.cn.
Chengdu University · CNSichuan University · CNChengdu University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant lectins have been investigated to elucidate their complicated mechanisms due to their remarkable anticancer activities. Although plant lectins seems promising as a potential anticancer agent for further preclinical and clinical uses, further research is still urgently needed and should include more focus on molecular mechanisms. Herein, a Naïve Bayesian model was developed to predict the protein-protein interaction (PPI), and thus construct the global human PPI network. Moreover, multiple sources of biological data, such as smallest shared biological process (SSBP), domain-domain interaction (DDI), gene co-expression profiles and cross-species interolog mapping were integrated to build the core apoptotic PPI network. In addition, we further modified it into a plant lectin-induced apoptotic cell death context. Then, we identified 22 apoptotic hub proteins in mesothelioma cells according to their different microarray expressions. Subsequently, we used combinational methods to predict microRNAs (miRNAs) which could negatively regulate the abovementioned hub proteins. Together, we demonstrated the ability of our Naïve Bayesian model-based network for identifying novel plant lectin-treated cancer cell apoptotic pathways. These findings may provide new clues concerning plant lectins as potential apoptotic inducers for cancer drug discovery.

Indexed as

Antineoplastic Agents, PhytogenicApoptosisCell Line, TumorCluster AnalysisComputational BiologyDatabases, ProteinDrug DiscoveryGene Expression ProfilingGene OntologyHumansMicroRNAsModels, BiologicalNeoplasmsPlant LectinsProtein Interaction MappingProtein Interaction MapsAntineoplastic Agents, PhytogenicMicroRNAsPlant LectinsRNA, MessengerapoptosiscancerNaïve Bayesian modelnovel pathwaysplant lectin

Identifiers

PMID26867193
PMCPMC4783960
OpenAlexW2273522477

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.