Evidence map›Paper›PMID 26867033›Full record

ArticleArthritis & rheumatology (Hoboken, N.J.)2016

Development of Biomarker Models to Predict Outcomes in Lupus Nephritis.

Bethany J Wolf, John C Spainhour, John M Arthur, Michael G Janech, Michelle Petri, Jim C Oates

Open access · greenAbstract read
In one paragraph

Article in Arthritis & rheumatology (Hoboken, N.J.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Lupus Nephritis Biomarkers: A Critical Review.International journal of molecular sciences · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Machine Learning in Rheumatic Diseases.Clinical reviews in allergy & immunology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Bethany J WolfMedical University of South Carolina, Charleston.
John C SpainhourMedical University of South Carolina, Charleston (current address: Georgia Institute of Technology and Emory University, Atlanta, Georgia).
John M ArthurRalph H. Johnson VA Medical Center and Medical University of South Carolina, Charleston.
Michael G JanechRalph H. Johnson VA Medical Center and Medical University of South Carolina, Charleston.
Michelle PetriJohns Hopkins University School of Medicine, Baltimore, Maryland.
Jim C OatesRalph H. Johnson VA Medical Center and Medical University of South Carolina, Charleston.
Medical University of South Carolina · USEmory University · USJohns Hopkins University · USRalph H. Johnson VA Medical Center · US

Funding

Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
South Carolina Clinical & Translational Research Institute (SCTR)UL1TR001450 · NCATS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T., FLUME, PATRICK A · 2015 to 2024
$41.1M
ZINC AND COPPER METABOLISM IN COLLAGEN DISORDERSM01RR001070 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI REVES, JOSEPH G · 1985 to 2009
$16.3M
SOUTH CAROLINA CLINICAL & TRANSLATIONAL RESEARCH INSTITUTE (SCTR)UL1RR029882 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2009 to 2011
$10.1M
Lupus CohortR01AR043727 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI PETRI, MICHELLE A · 1997 to 2015
$8.2M
Patient Resource CoreP60AR062755 · NIAMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI NIETERT, PAUL J · 2012 to 2016
$5.8M
Role of reactive intermediates in lupus nephritisR01AR045476 · NIAMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI GILKESON, GARY S, OATES, JAMES C · 1999 to 2012
$3.5M
Hopkins Lupus CohortR01AR069572 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI PETRI, MICHELLE A · 2016 to 2020
$3.4M
Biomarkers of Early Renal Functional Decline in Type 2 DiabetesR01DK101034 · NIDDK · UNIV OF ARKANSAS FOR MED SCIS · PI ARTHUR, JOHN M. · 2014 to 2017
$1.2M
Urine protein markers of disease in lupus nephritisR21AR051719 · NIAMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI OATES, JAMES C · 2004 to 2005
$126k
Urine biomarkers of lupus nephritis pathology and response to therapyI01CX000218 · VA · RALPH H JOHNSON VA MEDICAL CENTER · PI OATES, JAMES C · 2011 to 2013
–
CSRD VA I01 CX000218NCATS NIH HHS UL1 TR001450NCRR NIH HHS M01 RR001070NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1 RR029882NIAMS NIH HHS P60 AR062755NIAMS NIH HHS R01 AR043727NIAMS NIH HHS R01 AR045476NIAMS NIH HHS R01 AR069572NIAMS NIH HHS R21 AR051719NIDDK NIH HHS R01 DK101034
6 · The paper itself

Abstract

objectiveThe American College of Rheumatology guidelines for the treatment of lupus nephritis recommend change in induction therapy when response to therapy has not occurred within 6 months. Response is not defined, and renal fibrosis can occur while waiting for this end point. Therefore, a decision support tool to better define response is needed to guide clinicians when starting patients on therapy. This study was undertaken to identify biomarker models with sufficient predictive power to develop such a tool.

methodsUrine samples from 140 patients with biopsy-proven lupus nephritis who had not yet started induction therapy were analyzed for a panel of urinary biomarkers. Univariate receiver operating characteristic (ROC) curves were generated for each individual biomarker and compared to the ROC area under the curve values from machine learning models developed using random forest algorithms. Biomarker models of outcome developed with novel markers in addition to clinical markers were compared to those developed with traditional clinical markers alone.

resultsModels developed with the combined traditional and novel biomarker panels demonstrated clinically meaningful predictive power. Markers most predictive of response were chemokines, cytokines, and markers of cellular damage.

conclusionThis is the first study to demonstrate the power of low-abundance biomarker panels and machine learning algorithms for predicting lupus nephritis outcomes. This is a critical first step in research to develop clinically meaningful decision support tools.

Indexed as

Models, BiologicalAdultAlgorithmsBiomarkersFeasibility StudiesFemaleHumansLupus NephritisMalePredictive Value of TestsTreatment OutcomeBiomarkers

Identifiers

PMID26867033
PMCPMC5201110
OpenAlexW2258476102

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.