Evidence map›Paper›PMID 26866629›Full record

ArticleStatistics in medicine2016

Using family members to augment genetic case-control studies of a life-threatening disease.

Lu Chen, Clarice R Weinberg, Jinbo Chen

Abstract read
In one paragraph

Article in Statistics in medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Lu ChenDepartment of Biostatistics and Epidemiology, University of Pennsylvania School of Medicine, Philadelphia, PA, 19104, U.S.A.
Clarice R WeinbergBiostatistics Branch, National Institute of Environmental Health, Research Triangle Park, NC, 27709, U.S.A.
Jinbo ChenDepartment of Biostatistics and Epidemiology, University of Pennsylvania School of Medicine, Philadelphia, PA, 19104, U.S.A.

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
Statistical Methods For Genetic EpidemiologyZIAES040007 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WEINBERG, CLARICE · 2009 to 2025
$6.5M
Statistical Methods In Epidemiology--generalZIAES040006 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WEINBERG, CLARICE · 2009 to 2025
$4.5M
Statistical Methods in Genetic Epidemiology ResearchR01ES016626 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI CHEN, JINBO · 2008 to 2012
$1.6M
Statistical Methods for Cancer Absolute Risk PredictionR01CA164305 · NCI · UNIVERSITY OF PENNSYLVANIA · PI CHEN, JINBO · 2013 to 2016
$1.4M
STATISTICAL METHODS IN REPRODUCTIVE EPIDEMIOLOGYZ01ES040007 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WEINBERG, CLARICE · 1997 to 2008
$512k
Efficient Design and Analytic Strategies for Enhancing the Power of Detecting G XR21ES020811 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MUKHERJEE, BHRAMAR · 2012 to 2014
$447k
STATISTICAL METHODS IN EPIDEMIOLOGY--GENERALZ01ES040006 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WEINBERG, CLARICE · 1997 to 2008
$65k
Intramural NIH HHS Z01 ES040006Intramural NIH HHS Z01 ES040007NCI NIH HHS P30 CA016520NCI NIH HHS R01 CA164305NIEHS NIH HHS R01 ES016626NIEHS NIH HHS R21 ES020811
6 · The paper itself

Abstract

Survival bias is difficult to detect and adjust for in case-control genetic association studies but can invalidate findings when only surviving cases are studied and survival is associated with the genetic variants under study. Here, we propose a design where one genotypes genetically informative family members (such as offspring, parents, and spouses) of deceased cases and incorporates that surrogate genetic information into a retrospective maximum likelihood analysis. We show that inclusion of genotype data from first-degree relatives permits unbiased estimation of genotype association parameters. We derive closed-form maximum likelihood estimates for association parameters under the widely used log-additive and dominant association models. Our proposed design not only permits a valid analysis but also enhances statistical power by augmenting the sample with indirectly studied individuals. Gene variants associated with poor prognosis can also be identified under this design. We provide simulation results to assess performance of the methods. Copyright © 2016 John Wiley & Sons, Ltd.

Indexed as

GenotypeLikelihood FunctionsCase-Control StudiesComputer SimulationHumansModels, GeneticRetrospective Studiescase-control studyfamily genetic datanon-ignorable missingnessretrospective maximum likelihoodsurvival bias

Identifiers

PMID26866629
PMCPMC4899219

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.