Evidence map›Paper›PMID 26866605›Full record

ArticlePloS one2016

Structural Study of the HD-PTP Bro1 Domain in a Complex with the Core Region of STAM2, a Subunit of ESCRT-0.

Juhyeon Lee, Kyoung-Jin Oh, Dasom Lee, Bo Yeon Kim, Joon Sig Choi, Bonsu Ku, Seung Jun Kim

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Juhyeon LeeDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.
Kyoung-Jin OhResearch Center for Metabolic Regulation, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.
Dasom LeeResearch Center for Metabolic Regulation, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.
Bo Yeon KimIncurable Diseases Therapeutics Research Center, World Class Institute, Korea Research Institute of Bioscience and Biotechnology, Ochang, Cheongwon, Korea.
Joon Sig ChoiDepartment of Biochemistry, Chungnam National University, Daejeon, Korea.
Bonsu KuDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.
Seung Jun KimDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.
Korea Research Institute of Bioscience and Biotechnology · KRChungnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

EGFR is a key player in cell proliferation and survival signaling, and its sorting into MVBs for eventual lysosomal degradation is controlled by the coordination of multiple ESCRT complexes on the endosomal membrane. HD-PTP is a cytosolic protein tyrosine phosphatase, and is associated with EGFR trafficking by interacting with the ESCRT-0 protein STAM2 and the ESCRT-III protein CHMP4B via its N-terminal Bro1 domain. Intriguingly, the homologous domain of two other human Bro1 domain-containing proteins, Alix and Brox, binds CHMP4B but not STAM2, despite their high structural similarity. To elucidate this binding specificity, we determined the complex structure of the HD-PTP Bro1 domain bound to the STAM2 core region. STAM2 binds to the hydrophobic concave pocket of the HD-PTP Bro1 domain, as CHMP4B does to the pocket of Alix, Brox, or HD-PTP but in the opposite direction. Critically, Thr145 of HD-PTP, corresponding to Lys151 of Alix and Arg145 of Brox, is revealed to be a determinant residue enabling this protein to bind STAM2, as the Alix- or Brox-mimicking mutations of this residue blocks the intermolecular interaction. This work therefore provides the structural basis for how HD-PTP recognizes the ESCRT-0 component to control EGFR sorting.

Indexed as

Adaptor Proteins, Signal TransducingCalcium-Binding ProteinsCalorimetryCell Cycle ProteinsCell ProliferationCell SurvivalCrystallography, X-RayEndosomal Sorting Complexes Required for TransportEndosomesErbB ReceptorsHumansHydrophobic and Hydrophilic InteractionsImmunoblottingImmunoprecipitationMultivesicular BodiesMutationAdaptor Proteins, Signal TransducingBROX protein, humanCalcium-Binding ProteinsCell Cycle ProteinsCHMP4B protein, humanEGFR protein, humanEndosomal Sorting Complexes Required for TransportErbB ReceptorsPDCD6IP protein, humanProtein Tyrosine Phosphatases, Non-ReceptorPTPN23 protein, humanRecombinant ProteinsSTAM2 protein, human

Identifiers

PMID26866605
PMCPMC4751086
OpenAlexW2269807002

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.