Evidence map›Paper›PMID 26866049›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2016

Active monitoring of formaldehyde diffusion into histological tissues with digital acoustic interferometry.

Daniel R Bauer, Benjamin Stevens, David Chafin, Abbey P Theiss, Michael Otter

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Perfusion fixation in brain banking: a systematic review.Acta neuropathologica communications · 2019
    Pooled it
  2. Review
  3. Article
  4. Article
  5. The BrainboxBrain communications · 2023
    Article
  6. Human Brain Lipidomics: Investigation of Formalin Fixed Brains.Frontiers in molecular neuroscience · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Evaluation of Formalin Fixation for Tissue Biopsies Using Shear Wave Laser Speckle Imaging System.IEEE journal of translational engineering in health and medicine · 2019
    Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Daniel R BauerVentana Medical Systems Inc. , 1910 East Innovation Park Drive, Tucson, Arizona 85755, United States.
Benjamin StevensVentana Medical Systems Inc. , 1910 East Innovation Park Drive, Tucson, Arizona 85755, United States.
David ChafinVentana Medical Systems Inc. , 1910 East Innovation Park Drive, Tucson, Arizona 85755, United States.
Abbey P TheissVentana Medical Systems Inc. , 1910 East Innovation Park Drive, Tucson, Arizona 85755, United States.
Michael OtterVentana Medical Systems Inc. , 1910 East Innovation Park Drive, Tucson, Arizona 85755, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The preservation of certain labile cancer biomarkers with formaldehyde-based fixatives can be considerably affected by preanalytical factors such as quality of fixation. Currently, there are no technologies capable of quantifying a fixative's concentration or the formation of cross-links in tissue specimens. This work examined the ability to detect formalin diffusion into a histological specimen in real time. As formaldehyde passively diffused into tissue, an ultrasound time-of-flight (TOF) shift of several nanoseconds was generated due to the distinct sound velocities of formalin and exchangeable fluid within the tissue. This signal was resolved with a developed digital acoustic interferometry algorithm, which compared the phase differential between signals and computed the absolute TOF with subnanosecond precision. The TOF was measured repeatedly across the tissue sample for several hours until diffusive equilibrium was realized. The change in TOF from 6-mm thick ex vivo human tonsil fit a single-exponential decay ([Formula: see text]) with rate constants that varied drastically spatially between 2 and 10 h ([Formula: see text]) due to substantial heterogeneity. This technology may prove essential to personalized cancer diagnostics by documenting and tracking biospecimen preanalytical fixation, guaranteeing their suitability for diagnostic assays, and speeding the workflow in clinical histopathology laboratories.

Indexed as

cancer biomarker detectionphosphoprotein preservationpreanalytical tissue processingtime of flightultrasound imaging

Identifiers

PMID26866049
PMCPMC4744337

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.