Evidence map›Paper›PMID 26865961›Full record

ArticleEcology and evolution2016

The use of an unsupervised learning approach for characterizing latent behaviors in accelerometer data.

Marianna Chimienti, Thomas Cornulier, Ellie Owen, Mark Bolton, Ian M Davies, Justin M J Travis, Beth E Scott

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 111 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Marianna ChimientiSchool of Biological Sciences University of Aberdeen Tillydrone Avenue Aberdeen AB24 2TZ UK; Marine Scotland Science Scottish Government Marine Laboratory PO Box 101375 Victoria Road Aberdeen AB11 9DB UK.
Thomas CornulierSchool of Biological Sciences University of Aberdeen Tillydrone Avenue Aberdeen AB24 2TZ UK.
Ellie OwenRSPB Centre for Conservation Science North Scotland Office Etive House, Beechwood Park Inverness IV2 6AL UK.
Mark BoltonRSPB Centre for Conservation Science The Lodge Sandy Bedfordshire SG19 2DL UK.
Ian M DaviesMarine Scotland Science Scottish Government Marine Laboratory PO Box 101 375 Victoria Road Aberdeen AB11 9DB UK.
Justin M J TravisSchool of Biological Sciences University of Aberdeen Tillydrone Avenue Aberdeen AB24 2TZ UK.
Beth E ScottSchool of Biological Sciences University of Aberdeen Tillydrone Avenue Aberdeen AB24 2TZ UK.
University of Aberdeen · GBRoyal Society for the Protection of Birds · GBScottish Government · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent increase in data accuracy from high resolution accelerometers offers substantial potential for improved understanding and prediction of animal movements. However, current approaches used for analysing these multivariable datasets typically require existing knowledge of the behaviors of the animals to inform the behavioral classification process. These methods are thus not well-suited for the many cases where limited knowledge of the different behaviors performed exist. Here, we introduce the use of an unsupervised learning algorithm. To illustrate the method's capability we analyse data collected using a combination of GPS and Accelerometers on two seabird species: razorbills (Alca torda) and common guillemots (Uria aalge). We applied the unsupervised learning algorithm Expectation Maximization to characterize latent behavioral states both above and below water at both individual and group level. The application of this flexible approach yielded significant new insights into the foraging strategies of the two study species, both above and below the surface of the water. In addition to general behavioral modes such as flying, floating, as well as descending and ascending phases within the water column, this approach allowed an exploration of previously unstudied and important behaviors such as searching and prey chasing/capture events. We propose that this unsupervised learning approach provides an ideal tool for the systematic analysis of such complex multivariable movement data that are increasingly being obtained with accelerometer tags across species. In particular, we recommend its application in cases where we have limited current knowledge of the behaviors performed and existing supervised learning approaches may have limited utility.

Indexed as

Accelerometer dataanimal movementsbehavioral classificationunsupervised learning

Identifiers

PMID26865961
PMCPMC4739568
OpenAlexW2255128034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.