Evidence map›Paper›PMID 26865661›Full record

ArticlePlant & cell physiology2016

Combining -Omics to Unravel the Impact of Copper Nutrition on Alfalfa (Medicago sativa) Stem Metabolism.

Bruno Printz, Gea Guerriero, Kjell Sergeant, Jean-Nicolas Audinot, Cédric Guignard, Jenny Renaut, Stanley Lutts, Jean-Francois Hausman

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Changes in the Proteome ofInternational journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Bruno PrintzLuxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, Luxembourg Université Catholique de Louvain, Earth and Life Institute Agronomy (ELI-A), Groupe de Recherche en Physiologie Végétale (GRPV), Louvain-la-Neuve, Belgium.
Gea GuerrieroLuxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, Luxembourg.
Kjell SergeantLuxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, Luxembourg kjell.sergeant@list.lu.
Jean-Nicolas AudinotLuxembourg Institute of Science and Technology (LIST), Materials Research and Technology (MRT) Department, Esch/Alzette, Luxembourg.
Cédric GuignardLuxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, Luxembourg.
Jenny RenautLuxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, Luxembourg.
Stanley LuttsUniversité Catholique de Louvain, Earth and Life Institute Agronomy (ELI-A), Groupe de Recherche en Physiologie Végétale (GRPV), Louvain-la-Neuve, Belgium.
Jean-Francois HausmanLuxembourg Institute of Science and Technology (LIST), Environmental Research and Innovation (ERIN) Department, Esch/Alzette, Luxembourg.
Luxembourg Institute of Science and Technology · LUUCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Copper can be found in the environment at concentrations ranging from a shortage up to the threshold of toxicity for plants, with optimal growth conditions situated in between. The plant stem plays a central role in transferring and distributing minerals, water and other solutes throughout the plant. In this study, alfalfa is exposed to different levels of copper availability, from deficiency to slight excess, and the impact on the metabolism of the stem is assessed by a non-targeted proteomics study and by the expression analysis of key genes controlling plant stem development. Under copper deficiency, the plant stem accumulates specific copper chaperones, the expression of genes involved in stem development is decreased and the concentrations of zinc and molybdenum are increased in comparison with the optimum copper level. At the optimal copper level, the expression of cell wall-related genes increases and proteins playing a role in cell wall deposition and in methionine metabolism accumulate, whereas copper excess imposes a reduction in the concentration of iron in the stem and a reduced abundance of ferritins. Secondary ion mass spectrometry (SIMS) analysis suggests a role for the apoplasm as a copper storage site in the case of copper toxicity.

Indexed as

Cell WallCluster AnalysisCopperCulture MediaExtracellular MatrixGene Expression Regulation, PlantMedicago sativaMetabolomicsMineralsNanotechnologyPhenotypePlant LeavesPlant ProteinsPlant RootsPlant StemsPrincipal Component AnalysisCopperCulture MediaMineralsPlant ProteinsProteomeATX1Cellulose synthaseCopper deficiencyCopper excessIonomicsStem

Identifiers

PMID26865661
PMCPMC4771972
OpenAlexW2337704721

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.