Evidence map›Paper›PMID 26862728›Full record

ArticleOncotarget2016

Screening the yeast genome for energetic metabolism pathways involved in a phenotypic response to the anti-cancer agent 3-bromopyruvate.

Paweł Lis, Paweł Jurkiewicz, Magdalena Cal-Bąkowska, Young H Ko, Peter L Pedersen, Andre Goffeau, Stanisław Ułaszewski

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Paweł LisDepartment of Genetics, Institute of Genetics and Microbiology, University of Wrocław, Wrocław, Poland.
Paweł JurkiewiczDepartment of Genetics, Institute of Genetics and Microbiology, University of Wrocław, Wrocław, Poland.
Magdalena Cal-BąkowskaDepartment of Genetics, Institute of Genetics and Microbiology, University of Wrocław, Wrocław, Poland.
Young H KoKoDiscovery LLC, UM BioPark, Innovation Center, Baltimore, MD, USA.
Peter L PedersenDepartments of Biological Chemistry and Oncology, Sydney Kimmel Comprehensive Cancer Center and Center for Obesity Research and Metabolism, John Hopkins University School of Medicine, Baltimore, MD, USA.
Andre GoffeauUnité de Biochimie Physiologique, Institut des Sciences de la Vie, Université Catholique de Louvain-la-Neuve, Louvain-la-Neuve, Belgium.
Stanisław UłaszewskiDepartment of Genetics, Institute of Genetics and Microbiology, University of Wrocław, Wrocław, Poland.
University of Wrocław · PLSidney Kimmel Comprehensive Cancer Center · USUCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study the detailed characteristic of the anti-cancer agent 3-bromopyruvate (3-BP) activity in the yeast Saccharomyces cerevisiae model is described, with the emphasis on its influence on energetic metabolism of the cell. It shows that 3-BP toxicity in yeast is strain-dependent and influenced by the glucose-repression system. Its toxic effect is mainly due to the rapid depletion of intracellular ATP. Moreover, lack of the Whi2p phosphatase results in strongly increased sensitivity of yeast cells to 3-BP, possibly due to the non-functional system of mitophagy of damaged mitochondria through the Ras-cAMP-PKA pathway. Single deletions of genes encoding glycolytic enzymes, the TCA cycle enzymes and mitochondrial carriers result in multiple effects after 3-BP treatment. However, it can be concluded that activity of the pentose phosphate pathway is necessary to prevent the toxicity of 3-BP, probably due to the fact that large amounts of NADPH are produced by this pathway, ensuring the reducing force needed for glutathione reduction, crucial to cope with the oxidative stress. Moreover, single deletions of genes encoding the TCA cycle enzymes and mitochondrial carriers generally cause sensitivity to 3-BP, while totally inactive mitochondrial respiration in the rho0 mutant resulted in increased resistance to 3-BP.

Indexed as

Cyclic AMPCyclic AMP-Dependent Protein KinasesEnergy MetabolismEnzyme InhibitorsGenome, FungalGlycolysisHumansMicrobial Sensitivity TestsMitochondriaMitophagyPentose Phosphate PathwayPyruvatesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsbromopyruvateCyclic AMPCyclic AMP-Dependent Protein KinasesEnzyme InhibitorsPyruvatesSaccharomyces cerevisiae ProteinsWhi2 protein, S cerevisiae3-bromopyruvate (3-BP)energetic metabolismgenomic screenSaccharomyces cerevisiaeWhi2

Identifiers

PMID26862728
PMCPMC4891110
OpenAlexW2292110901

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.