Evidence map›Paper›PMID 26862170›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

REDUCED CHLOROPLAST COVERAGE genes from Arabidopsis thaliana help to establish the size of the chloroplast compartment.

Robert M Larkin, Giovanni Stefano, Michael E Ruckle, Andrea K Stavoe, Christopher A Sinkler, Federica Brandizzi, Carolyn M Malmstrom, Katherine W Osteryoung

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 55 citations in OpenAlex.

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  13. Autophagy in plants.Autophagy reports · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Robert M LarkinDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824; Michigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824 robertmorganlarkin@gmail.com.
Giovanni StefanoMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824;
Michael E RuckleMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824.
Andrea K StavoeMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824;
Christopher A SinklerMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824;
Federica BrandizziDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824; Michigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824;
Carolyn M MalmstromDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824;
Katherine W OsteryoungDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824;
Michigan State University · US

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
NIGMS NIH HHS T32 GM007223
6 · The paper itself

Abstract

Eukaryotic cells require mechanisms to establish the proportion of cellular volume devoted to particular organelles. These mechanisms are poorly understood. From a screen for plastid-to-nucleus signaling mutants in Arabidopsis thaliana, we cloned a mutant allele of a gene that encodes a protein of unknown function that is homologous to two other Arabidopsis genes of unknown function and to FRIENDLY, which was previously shown to promote the normal distribution of mitochondria in Arabidopsis. In contrast to FRIENDLY, these three homologs of FRIENDLY are found only in photosynthetic organisms. Based on these data, we proposed that FRIENDLY expanded into a small gene family to help regulate the energy metabolism of cells that contain both mitochondria and chloroplasts. Indeed, we found that knocking out these genes caused a number of chloroplast phenotypes, including a reduction in the proportion of cellular volume devoted to chloroplasts to 50% of wild type. Thus, we refer to these genes as REDUCED CHLOROPLAST COVERAGE (REC). The size of the chloroplast compartment was reduced most in rec1 mutants. The REC1 protein accumulated in the cytosol and the nucleus. REC1 was excluded from the nucleus when plants were treated with amitrole, which inhibits cell expansion and chloroplast function. We conclude that REC1 is an extraplastidic protein that helps to establish the size of the chloroplast compartment, and that signals derived from cell expansion or chloroplasts may regulate REC1.

Indexed as

ArabidopsisArabidopsis ProteinsCell NucleusChloroplastsGenes, ChloroplastSignal TransductionArabidopsis ProteinsArabidopsischlorophyllchloroplastchloroplast coverageplastid signaling

Identifiers

PMID26862170
PMCPMC4776492
OpenAlexW2255444927

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.