Evidence map›Paper›PMID 26862115›Full record

ArticleCancer research2016

Detection of an Immunogenic HERV-E Envelope with Selective Expression in Clear Cell Kidney Cancer.

Elena Cherkasova, Claire Scrivani, Susan Doh, Quinn Weisman, Yoshiyuki Takahashi, Nanae Harashima, Hisayuki Yokoyama, Ramaprasad Srinivasan, W Marston Linehan, Michael I Lerman and 1 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05372302 (Collecting Ducts Carcinoma), which is not on this map. Cited by 94 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed, 2 pooled it
14.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05372302 unknown statusnot on this mapstarted 2021, after this paper: background citation

Collecting Ducts Carcinoma: in Depth Exploration and Biologically Driven Therapy (CICERONE)

TypeobservationalSponsorFondazione IRCCS Istituto Nazionale dei Tumori, MilanoRan2021 to 2022Enrolled100ConditionsCollecting Duct Carcinoma
3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 2 syntheses or guidelines pooled it, 118 citations in OpenAlex.

  1. Pooled it
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  3. Transcriptomic Correlates of Tumor Cell PD-L1 Expression and Response to Nivolumab Monotherapy in Metastatic Clear Cell Renal Cell Carcinoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Elena CherkasovaHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Claire ScrivaniHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Susan DohHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Quinn WeismanHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Yoshiyuki TakahashiHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Nanae HarashimaHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Hisayuki YokoyamaHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Ramaprasad SrinivasanUrologic Oncology Branch, NCI, NIH, Bethesda, Maryland.
W Marston LinehanUrologic Oncology Branch, NCI, NIH, Bethesda, Maryland.
Michael I LermanHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland.
Richard W ChildsHematology Branch, National Heart, Lung, and Blood Institute, NIH, Bethesda, Maryland. childsr@mail.nih.gov.
National Heart Lung and Blood Institute · USNational Institutes of Health · US

Funding

Allogeneic Immunotherapy for cancer and nonmalignant hematological disordersZIAHL002345 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI CHILDS, RICHARD · 2009 to 2025
$53.3M
Molecular Therapeutics of Kidney Cancer: VHL Gene and Fumarate Hydratase GeneZIABC011038 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$29.8M
Clinical Studies of the Molecular Genetic Basis of Kidney CancerZIABC011028 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$17.9M
Targeting Genetic and Metabolic Alterations in Distinct Subtypes of RCCZIABC011648 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SRINIVASAN, RAMAPRASAD · 2015 to 2025
$12.2M
Intramural NIH HHS Z99 HL999999
6 · The paper itself

Abstract

VHL-deficient clear cell renal cell carcinomas (ccRCC), the most common form of kidney cancer, express transcripts derived from the novel human endogenous retrovirus HERV-E (named CT-RCC HERV-E). In this study, we define a transcript encoding the entire envelope gene of HERV-E as expressed selectively in ccRCC tumors, as distinct from normal kidney tissues or other tumor types. Sequence analysis of this envelope transcript revealed long open reading frames encoding putative surface and transmembrane envelope proteins. Retroviral envelopes are known to be capable of eliciting immunity in humans. Accordingly, we found that HLA-A*0201-restricted peptides predicted to be products of the CT-RCC HERV-E envelope transcript-stimulated CD8(+) T cells, which could recognize HLA-A*0201-positive HERV-E-expressing kidney tumor cells. Overall, our results offer evidence of unique HERV-E envelope peptides presented on the surface of ccRCC cells, offering potentially useful tumor-restricted targets for T-cell-based immunotherapy of kidney cancer. Cancer Res; 76(8); 2177-85. ©2016 AACR.

Indexed as

Amino Acid SequenceCarcinoma, Renal CellCD8-Positive T-LymphocytesCell Line, TumorEndogenous RetrovirusesEnzyme-Linked Immunosorbent AssayGenes, ViralHumansKidney NeoplasmsViral Envelope ProteinsViral Envelope Proteins

Identifiers

PMID26862115
PMCPMC4873424
OpenAlexW2277263137

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.