Evidence map›Paper›PMID 26861878›Full record

ArticleThe Journal of biological chemistry2016

Elongation of the Poly-γ-glutamate Tail of F420 Requires Both Domains of the F420:γ-Glutamyl Ligase (FbiB) of Mycobacterium tuberculosis.

Ghader Bashiri, Aisyah M Rehan, Sreevalsan Sreebhavan, Heather M Baker, Edward N Baker, Christopher J Squire

Abstract read
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Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

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0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. Poly-γ-glutamylation of biomolecules.Nature communications · 2024
    Article
  4. Article
  5. Identification ofInfection and drug resistance · 2024
    Review
  6. Article
  7. Article
  8. Redox Coenzyme FApplied and environmental microbiology · 2020
    Article
  9. Article
  10. Adduct Formation of Delamanid with NAD in Mycobacteria.Antimicrobial agents and chemotherapy · 2020
    Article
  11. Article
  12. Coenzyme FJournal of bacteriology · 2018
    Article
  13. Evolutionary and molecular foundations of multiple contemporary functions of the nitroreductase superfamily.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. The methanogenic redox cofactor FThe ISME journal · 2017
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ghader BashiriFrom the Structural Biology Laboratory, School of Biological Sciences and Maurice Wilkins Centre for Molecular Biodiscovery, and.
Aisyah M RehanFrom the Structural Biology Laboratory, School of Biological Sciences and Maurice Wilkins Centre for Molecular Biodiscovery, and.
Sreevalsan Sreebhavanthe Faculty of Medical and Health Sciences, University of Auckland, Auckland 1010, New Zealand.
Heather M BakerFrom the Structural Biology Laboratory, School of Biological Sciences and Maurice Wilkins Centre for Molecular Biodiscovery, and.
Edward N BakerFrom the Structural Biology Laboratory, School of Biological Sciences and Maurice Wilkins Centre for Molecular Biodiscovery, and.
Christopher J SquireFrom the Structural Biology Laboratory, School of Biological Sciences and Maurice Wilkins Centre for Molecular Biodiscovery, and c.squire@auckland.ac.nz.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cofactor F420is an electron carrier with a major role in the oxidoreductive reactions ofMycobacterium tuberculosis, the causative agent of tuberculosis. A γ-glutamyl ligase catalyzes the final steps of the F420biosynthesis pathway by successive additions ofl-glutamate residues to F420-0, producing a poly-γ-glutamate tail. The enzyme responsible for this reaction in archaea (CofE) comprises a single domain and produces F420-2 as the major species. The homologousM. tuberculosisenzyme, FbiB, is a two-domain protein and produces F420with predominantly 5-7l-glutamate residues in the poly-γ-glutamate tail. The N-terminal domain of FbiB is homologous to CofE with an annotated γ-glutamyl ligase activity, whereas the C-terminal domain has sequence similarity to an FMN-dependent family of nitroreductase enzymes. Here we demonstrate that full-length FbiB adds multiplel-glutamate residues to F420-0in vitroto produce F420-5 after 24 h; communication between the two domains is critical for full γ-glutamyl ligase activity. We also present crystal structures of the C-terminal domain of FbiB in apo-, F420-0-, and FMN-bound states, displaying distinct sites for F420-0 and FMN ligands that partially overlap. Finally, we discuss the features of a full-length structural model produced by small angle x-ray scattering and its implications for the role of N- and C-terminal domains in catalysis.

Indexed as

Amino Acid SequenceBacterial ProteinsBiocatalysisCatalytic DomainCloning, MolecularCoenzymesCrystallography, X-RayEscherichia coliGene ExpressionLigasesModels, MolecularMolecular Sequence DataMycobacterium tuberculosisPolyglutamic AcidProtein MultimerizationProtein Structure, SecondaryBacterial ProteinsCoenzymesLigasespoly(gamma-glutamic acid)Polyglutamic Acidcofactor F420crystal structureFbiBgamma-glutamyl ligasehigh-performance liquid chromatography (HPLC)mass spectrometry (MS)Mycobacterium tuberculosispoly-gamma-glutamate tailx-ray crystallography

Identifiers

PMID26861878
PMCPMC4807274

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.