Evidence map›Paper›PMID 26861863›Full record

ArticlePediatric rheumatology online journal2016

Mitochondrial and oxidative stress genes are differentially expressed in neutrophils of sJIA patients treated with tocilizumab: a pilot microarray study.

Ebun Omoyinmi, Raja Hamaoui, Annette Bryant, Mike Chao Jiang, Trin Athigapanich, Despina Eleftheriou, Mike Hubank, Paul Brogan, Patricia Woo

Open access · goldAbstract read
In one paragraph

Article in Pediatric rheumatology online journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

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  8. Potential roles of mitochondrial cofactors in the adjuvant mitigation of proinflammatory acute infections, as in the case of sepsis and COVID-19 pneumonia.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ebun OmoyinmiInfection, Inflammation and Rheumatology Section, Institute of Child Health, UCL, London, UK. e.omoyinmi@ucl.ac.uk.
Raja HamaouiCentre for Adolescent Rheumatology, University College London, 4th Floor, Rayne Building, 5, University Street, London, WC1E 6JF, UK. rajahamb@yahoo.fr.
Annette BryantCentre for Adolescent Rheumatology, University College London, 4th Floor, Rayne Building, 5, University Street, London, WC1E 6JF, UK. abryant4@hotmail.com.
Mike Chao JiangInfection, Inflammation and Rheumatology Section, Institute of Child Health, UCL, London, UK. jcmike1992@hotmail.com.
Trin AthigapanichInfection, Inflammation and Rheumatology Section, Institute of Child Health, UCL, London, UK. chokie88@gmail.com.
Despina EleftheriouInfection, Inflammation and Rheumatology Section, Institute of Child Health, UCL, London, UK. d.eleftheriou@ucl.ac.uk.
Mike HubankUCL Genomics, Institute of Child Health, London, UK. m.hubank@ucl.ac.uk.
Paul BroganInfection, Inflammation and Rheumatology Section, Institute of Child Health, UCL, London, UK. p.brogan@ucl.ac.uk.
Patricia WooCentre for Adolescent Rheumatology, University College London, 4th Floor, Rayne Building, 5, University Street, London, WC1E 6JF, UK. patricia.woo@ucl.ac.uk.
University College London · GB

Funding

Arthritis Research UK
6 · The paper itself

Abstract

backgroundVarious pathways involved in the pathogenesis of sJIA have been identified through gene expression profiling in peripheral blood mononuclear cells (PBMC), but not in neutrophils. Since neutrophils are important in tissue damage during inflammation, and are elevated as part of the acute phase response, we hypothesised that neutrophil pathways could also be important in the pathogenesis of sJIA. We therefore studied the gene profile in both PBMC and neutrophils of sJIA patients treated with tocilizumab.

methodsWe studied the transcriptomes of peripheral blood mononuclear cells (PBMC) and neutrophils from eight paired samples obtained from 4 sJIA patients taken before and after treatment, selected on the basis that they achieved ACR90 responses within 12 weeks of therapy initiation with tocilizumab. RNA was extracted and gene expression profiling was performed using Affymetrix GeneChip Human Genome U133 Plus 2.0 microarray platform. A longitudinal analysis using paired t-test (p < 0.05 and FC ≥ 1.5) was applied to identify differentially expressed genes (DEGs) between the two time points followed by ingenuity pathway analysis. Gene Set Enrichment Analysis (GSEA) and quantitative real-time PCR were then performed to verify the microarray results.

resultsGene ontology analysis in neutrophils revealed that response to tocilizumab significantly altered genes regulating mitochondrial dysfunction and oxidative stress (p = 4.6E-05). This was independently verified with GSEA, by identifying a set of oxidative genes whose expression correlated with response to tocilizumab. In PBMC, treatment of sJIA with tocilizumab appeared to affect genes in Oncostatin M signalling and B cell pathways.

conclusionsFor the first time we demonstrate that neutrophils from sJIA patients responding to tocilizumab showed significantly different changes in gene expression. These data could highlight the importance of mitochondrial genes that modulate oxidative stress in the pathogenesis of sJIA.

Indexed as

AdolescentAntibodies, Monoclonal, HumanizedArthritis, JuvenileChildChild, PreschoolCytokinesFemaleGene Expression RegulationHumansMaleMicroarray AnalysisNeutrophilsOxidative StressPilot ProjectsReal-Time Polymerase Chain ReactionRNAAntibodies, Monoclonal, HumanizedCytokinesRNAtocilizumab

Identifiers

PMID26861863
PMCPMC4746827
OpenAlexW2256861855

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.