Evidence map›Paper›PMID 26861594›Full record

ArticleBMC genomics2016

Transcriptome adaptation of the bovine mammary gland to diets rich in unsaturated fatty acids shows greater impact of linseed oil over safflower oil on gene expression and metabolic pathways.

Eveline M Ibeagha-Awemu, Ran Li, Adolf A Ammah, Pier-Luc Dudemaine, Nathalie Bissonnette, Chaouki Benchaar, Xin Zhao

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
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  6. Review
  7. Article
  8. CircEZH2 Regulates Milk Fat Metabolism through miR-378b Sponge Activity.Animals : an open access journal from MDPI · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Nutrigenomics in livestock-recent advances.Journal of applied genetics · 2020
    Review
  19. High rumen degradable starch decreased goat milk fat viaJournal of animal science and biotechnology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Eveline M Ibeagha-AwemuAgriculture and Agri-Food Canada, Research and Development Centre, Sherbrooke, Quebec, J1M 0C8, Canada. eveline.ibeagha-awemu@agr.gc.ca.
Ran LiAgriculture and Agri-Food Canada, Research and Development Centre, Sherbrooke, Quebec, J1M 0C8, Canada. ran.li1986@hotmail.com.
Adolf A AmmahAgriculture and Agri-Food Canada, Research and Development Centre, Sherbrooke, Quebec, J1M 0C8, Canada. Ammah.Adolf@AGR.GC.CA.
Pier-Luc DudemaineAgriculture and Agri-Food Canada, Research and Development Centre, Sherbrooke, Quebec, J1M 0C8, Canada. Pier-Luc.dudemaine@agr.gc.ca.
Nathalie BissonnetteAgriculture and Agri-Food Canada, Research and Development Centre, Sherbrooke, Quebec, J1M 0C8, Canada. nathalie.bissonnette@agr.gc.ca.
Chaouki BenchaarAgriculture and Agri-Food Canada, Research and Development Centre, Sherbrooke, Quebec, J1M 0C8, Canada. chaouki.benchaar@agr.gc.ca.
Xin ZhaoDepartment of Animal Science, McGill University, Ste-Anne-de-Bellevue, Quebec, H9X 3 V9, Canada. xin.zhao@mcgill.ca.
Agriculture and Agri-Food Canada · CAMcGill University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNutritional strategies can decrease saturated fatty acids (SFAs) and increase health beneficial fatty acids (FAs) in bovine milk. The pathways/genes involved in these processes are not properly defined. Next-generation RNA-sequencing was used to investigate the bovine mammary gland transcriptome following supplemental feeding with 5% linseed oil (LSO) or 5% safflower oil (SFO). Holstein cows in mid-lactation were fed a control diet for 28 days (control period) followed by supplementation with 5% LSO (12 cows) or 5% SFO (12 cows) for 28 days (treatment period). Milk and mammary gland biopsies were sampled on days-14 (control period), +7 and +28 (treatment period). Milk was used to measure fat(FP)/protein(PP) percentages and individual FAs while RNA was subjected to sequencing.

resultsMilk FP was decreased by 30.38% (LSO) or 32.42% (SFO) while PP was unaffected (LSO) or increased (SFO). Several beneficial FAs were increased by LSO (C18:1n11t, CLA:10t12c, CLA:9c11t, C20:3n3, C20:5n3, C22:5n3) and SFO (C18:1n11t, CLA:10t12c, C20:1c11, C20:2, C20:3n3) while several SFAs (C4:0, C6:0, C8:0, C14:0, C16:0, C17:0, C24:0) were decreased by both treatments (P < 0.05). 1006 (460 up- and 546 down-regulated) and 199 (127 up- and 72 down-regulated) genes were significantly differentially regulated (DE) by LSO and SFO, respectively. Top regulated genes (≥ 2 fold change) by both treatments (FBP2, UCP2, TIEG2, ANGPTL4, ALDH1L2) are potential candidate genes for milk fat traits. Involvement of SCP2, PDK4, NQO1, F2RL1, DBI, CPT1A, CNTFR, CALB1, ACADVL, SPTLC3, PIK3CG, PIGZ, ADORA2B, TRIB3, HPGD, IGFBP2 and TXN in FA/lipid metabolism in dairy cows is being reported for the first time. Functional analysis indicated similar and different top enriched functions for DE genes. DE genes were predicted to significantly decrease synthesis of FA/lipid by both treatments and FA metabolism by LSO. Top canonical pathways associated with DE genes of both treatments might be involved in lipid/cholesterol metabolism.

conclusionThis study shows that rich α-linolenic acid LSO has a greater impact on mammary gland transcriptome by affecting more genes, pathways and processes as compared to SFO, rich in linoleic acid. Our study suggest that decrease in milk SFAs was due to down-regulation of genes in the FA/lipid synthesis and lipid metabolism pathways while increase in PUFAs was due to increased availability of ruminal biohydrogenation metabolites that were up taken and incorporated into milk or used as substrate for the synthesis of PUFAs.

Indexed as

Animal FeedGene Expression RegulationLinseed OilMetabolic Networks and PathwaysSafflower OilTranscriptomeAdaptation, BiologicalAnimalsBody WeightCattleFatty Acids, UnsaturatedGene Regulatory NetworksHigh-Throughput Nucleotide SequencingHumansMammary Glands, HumanReproducibility of ResultsFatty Acids, UnsaturatedLinseed OilSafflower Oil

Identifiers

PMID26861594
PMCPMC4748538
OpenAlexW2266479271

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.