Evidence map›Paper›PMID 26861560›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2016

Long-noncoding RNAs in basal cell carcinoma.

Michael Sand, Falk G Bechara, Daniel Sand, Thilo Gambichler, Stephan A Hahn, Michael Bromba, Eggert Stockfleth, Schapoor Hessam

Abstract read
PubMed Publisher
In one paragraph

Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 38 citations in OpenAlex.

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  7. Article
  8. The Immunogenetics of Non-melanoma Skin Cancer.Advances in experimental medicine and biology · 2022
    Article
  9. Elevated LINC01550 induces the apoptosis and cell cycle arrest of melanoma.Medical oncology (Northwood, London, England) · 2021
    Article
  10. Noncoding RNAs: emerging players in skin cancers pathogenesis.American journal of cancer research · 2021
    Article
  11. Long non-coding RNAs in cutaneous biology and keratinocyte carcinomas.Cellular and molecular life sciences : CMLS · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Michael SandDermatologic Surgery Unit, Department of Dermatology, Venereology and Allergology, Ruhr-University Bochum, 44791, Bochum, Germany. michael.sand@ruhr-uni-bochum.de.
Falk G BecharaDermatologic Surgery Unit, Department of Dermatology, Venereology and Allergology, Ruhr-University Bochum, 44791, Bochum, Germany.
Daniel SandUniversity of Michigan Kellogg Eye Center, Ann Arbor, MI, 48105, USA.
Thilo GambichlerDermatologic Surgery Unit, Department of Dermatology, Venereology and Allergology, Ruhr-University Bochum, 44791, Bochum, Germany.
Stephan A HahnDepartment of Internal Medicine, Knappschaftskrankenhaus University of Bochum, Zentrum für Klinische Forschung, Labor für Molekulare Gastroenterologische Onkologie, 44780, Bochum, Germany.
Michael BrombaDepartment of Plastic Surgery, St. Josef Hospital, Catholic Clinics of the Ruhr Peninsula, 45257, Essen, Germany.
Eggert StockflethDermatologic Surgery Unit, Department of Dermatology, Venereology and Allergology, Ruhr-University Bochum, 44791, Bochum, Germany.
Schapoor HessamDermatologic Surgery Unit, Department of Dermatology, Venereology and Allergology, Ruhr-University Bochum, 44791, Bochum, Germany.
Ruhr University Bochum · DESt. Josef-Hospital · DEUniversitätsklinikum Knappschaftskrankenhaus Bochum · DEW.K. Kellogg Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are fundamental regulators of pre- and post-transcriptional gene regulation. Over 35,000 different lncRNAs have been described with some of them being involved in cancer formation. The present study was initiated to describe differentially expressed lncRNAs in basal cell carcinoma (BCC). Patients with BCC (n = 6) were included in this study. Punch biopsies were harvested from the tumor center and nonlesional epidermal skin (NLES, control, n = 6). Microarray-based lncRNA and mRNA expression profiles were identified through screening for 30,586 lncRNAs and 26,109 protein-coding transcripts (mRNAs). The microarray data were validated by RT-PCR in a second set of BCC versus control samples. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses of mRNAs were performed to assess biologically relevant pathways. A total of 1851 lncRNAs were identified as being significantly up-regulated, whereas 2165 lncRNAs were identified as being significantly down-regulated compared to nonlesional skin (p < 0.05). Oncogenic and/or epidermis-specific lncRNAs, such as CASC15 or ANRIL, were among the differentially expressed sequences. GO analysis showed that the highest enriched GO targeted by up-regulated transcripts was "extracellular matrix." KEGG pathway analysis showed the highest enrichment scores in "Focal adhesion." BCC showed a significantly altered lncRNA and mRNA expression profile. Dysregulation of previously described lncRNAs may play a role in the molecular pathogenesis of BCC and should be subject of further analysis.

Indexed as

AgedAged, 80 and overBasal Cell CarcinomaEpidermisFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene OntologyHumansMaleMiddle AgedReal-Time Polymerase Chain ReactionRNA, Long NoncodingRNA, MessengerRNA, NeoplasmSkin NeoplasmsRNA, Long NoncodingRNA, MessengerRNA, NeoplasmBasal cell carcinomaEpithelial skin cancerLong noncoding RNAsNoncoding RNAsNonmelanoma skin cancer

Identifiers

PMID26861560
OpenAlexW2253683499

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.