Evidence map›Paper›PMID 26860465›Full record

ArticleBMC cancer2016

Tumor slice culture system to assess drug response of primary breast cancer.

Kishan A T Naipal, Nicole S Verkaik, Humberto Sánchez, Carolien H M van Deurzen, Michael A den Bakker, Jan H J Hoeijmakers, Roland Kanaar, Maaike P G Vreeswijk, Agnes Jager, Dik C van Gent

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03798587 (PNA-mediated Inhibition of the SENP1 Molecular Hub as a Potential Therapeutic Approach for the Suppression of Osteosarcoma Growth and Metastasis), which is not on this map. Cited by 100 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 1 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03798587 unknown statusnot on this mapstarted 2020, after this paper: background citation

PNA-mediated Inhibition of the SENP1 Molecular Hub as a Potential Therapeutic Approach for the Suppression of Osteosarcoma Growth and Metastasis (PNA-OS)

Typeobservational_patient_registrySponsorI.R.C.C.S Ospedale Galeazzi-Sant'AmbrogioRan2020 to 2021Enrolled15ConditionsPrimary Osteosarcoma of Bone
3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 1 synthesis or guideline pooled it, 154 citations in OpenAlex.

  1. Pooled it
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  5. Motion-based tissueClinical and translational radiation oncology · 2026
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40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Kishan A T NaipalDepartment of Genetics, Cancer Genomics Netherlands, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. k.naipal@erasmusmc.nl.
Nicole S VerkaikDepartment of Genetics, Cancer Genomics Netherlands, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. n.verkaik@erasmusmc.nl.
Humberto SánchezDepartment of Genetics, Cancer Genomics Netherlands, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. h.sanchezgonzalez@erasmusmc.nl.
Carolien H M van DeurzenDepartment of Pathology, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. c.h.m.vandeurzen@erasmusmc.nl.
Michael A den BakkerDepartment of Pathology, Maasstad Hospital, Maasstadweg 21, Rotterdam, 3079 DZ, The Netherlands. BakkerMA@maasstadziekenhuis.nl.
Jan H J HoeijmakersDepartment of Genetics, Cancer Genomics Netherlands, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. j.hoeijmakers@erasmusmc.nl.
Roland KanaarDepartment of Genetics, Cancer Genomics Netherlands, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. r.kanaar@erasmusmc.nl.
Maaike P G VreeswijkDepartment of Human Genetics, Leiden University Medical Center, P.O. Box 9600, Leiden, 2300 RC, The Netherlands. M.P.G.Vreeswijk@lumc.nl.
Agnes JagerDepartment of Medical Oncology, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. a.jager@erasmusmc.nl.
Dik C van GentDepartment of Genetics, Cancer Genomics Netherlands, Erasmus University Medical Center, PO box 2040, Rotterdam, 3000CA, The Netherlands. d.vangent@erasmusmc.nl.
Erasmus MC · NLLeiden University Medical Center · NLMaasstad Ziekenhuis · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe high incidence of breast cancer has sparked the development of novel targeted and personalized therapies. Personalization of cancer treatment requires reliable prediction of chemotherapy responses in individual patients. Effective selection can prevent unnecessary treatment that would mainly result in the unwanted side effects of the therapy. This selection can be facilitated by characterization of individual tumors using robust and specific functional assays, which requires development of powerful ex vivo culture systems and procedures to analyze the response to treatment.

methodsWe optimized culture methods for primary breast tumor samples that allowed propagation of tissue ex vivo. We combined several tissue culture strategies, including defined tissue slicing technology, growth medium optimization and use of a rotating platform to increase nutrient exchange.

resultsWe could maintain tissue cultures for at least 7 days without losing tissue morphology, viability or cell proliferation. We also developed methods to determine the cytotoxic response of individual tumors to the chemotherapeutic treatment FAC (5-FU, Adriamycin [Doxorubicin] and Cyclophosphamide). Using this tool we designated tumors as sensitive or resistant and distinguished a clinically proven resistant tumor from other tumors.

conclusionThis method defines conditions that allow ex vivo testing of individual tumor responses to anti-cancer drugs and therefore might improve personalization of breast cancer treatment.

Indexed as

Drug Screening Assays, AntitumorAntineoplastic AgentsAntineoplastic Combined Chemotherapy ProtocolsBreast NeoplasmsCyclophosphamideDoxorubicinDrug Resistance, NeoplasmFemaleFluorouracilHumansPrecision MedicineTissue Culture TechniquesTumor Cells, CulturedAntineoplastic AgentsCyclophosphamideDoxorubicinFluorouracil

Identifiers

PMID26860465
PMCPMC4748539
OpenAlexW2254244961

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.