Evidence map›Paper›PMID 26860360›Full record

ArticleAnnals of clinical microbiology and antimicrobials2016

The carbapenem-resistant Enterobacteriaceae threat is growing: NDM-1 epidemic at a training hospital in Turkey.

Oguz Karabay, Mustafa Altindis, Mehmet Koroglu, Onur Karatuna, Özlem Akkaya Aydemir, Ali Fuat Erdem

Abstract read
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Article in Annals of clinical microbiology and antimicrobials, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. ESBL-ProducingVeterinary sciences · 2025
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  9. Review
  10. Emergence of New Delhi Metallo-Beta-Lactamase (NDM) andBioMed research international · 2019
    Article
  11. Article
  12. Prevalence and risk factors for CTX-M gram-negative bacteria in hospitalized patients at a tertiary care hospital in Kilimanjaro, Tanzania.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2018
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Oguz KarabayDepartment of Infectious Diseases and Clinical Microbiology, Health Sciences Institute and School of Medicine of Sakarya University, 54100, Sakarya, Turkey. drkarabay@yahoo.com.
Mustafa AltindisDepartment of Medical Microbiology, School of Medicine, Sakarya University, Sakarya, Turkey. maltindis@gmail.com.
Mehmet KorogluDepartment of Medical Microbiology, School of Medicine, Sakarya University, Sakarya, Turkey. mkoroglu@yahoo.com.
Onur KaratunaDepartment of Medical Microbiology, School of Medicine, Acıbadem University, Istanbul, Turkey. onur.karatuna@acibadem.edu.tr.
Özlem Akkaya AydemirDepartment of Medical Microbiology, School of Medicine, Sakarya University, Sakarya, Turkey. akkozlem@hotmail.com.
Ali Fuat ErdemDepartment of Anesthesiology, School of Medicine, Sakarya University, Sakarya, Turkey. aerdem@sakarya.edu.tr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRecently, new carbapenemases in Enterobacteriaceae strains and non-fermentative gram-negative bacilli have been reported. The New Delhi metallo-β-lactamase-1 (NDM-1) is a major problem around the world. The purpose of this article is to address the NDM-1 Klebsiella pneumoniae epidemic detected in eight cases in our hospital.

methodsBacteria identified in this epidemic were from patients already admitted to the intensive care unit of the Sakarya University Training and Research Hospital during efforts toward establishment of infection surveillance and control program. Antimicrobial susceptibility testing of strains was performed using the VITEK 2 system (bioMérieux, France), E-test gradient strips (bioMérieux, France), and the disc diffusion test. For the metallo-beta-lactamase activity, the combined disc diffusion test and modified Hodge test as phenotypic tests were performed. To identify the resistance gene, the Xpert Carba-R kit (Cepheid Inc., USA) and an in-house multiplex polymerase chain reaction (PCR) method designed for five common carbapenemase genes (IMP, VIM, KPC, NDM-1, and OXA-48) were employed. The clonal relationship of these strains was explored by the repetitive PCR (rep-PCR, DiversiLab System, bioMérieux, France) method.

resultsDuring the December 2014 to March 2015 period, NDM-1 positive K. pneumoniae strains were detected in eight patients. All of these strains were found to produce NDM-1, while two of them also revealed the presence of OXA-48. The rep-PCR results reveal a clonal proximity of 95 % for six of the eight strains.

conclusionsOur findings suggest the tendency of NDM-1-producing strains to spread in our country as well. A carbapenem-resistant K. pneumoniae threat may pose a great risk to our country. It is clear that more comprehensive infection control precautions should be implemented in our hospitals.

Indexed as

Drug Resistance, BacterialAdultAgedAged, 80 and overAnti-Bacterial Agentsbeta-LactamasesCarbapenemsEnterobacteriaceaeEnterobacteriaceae InfectionsFemaleHospitals, TeachingHumansMaleMicrobial Sensitivity TestsMiddle AgedTurkeyAnti-Bacterial Agentsbeta-lactamase NDM-1beta-LactamasesCarbapenems

Identifiers

PMID26860360
PMCPMC4748493

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.