Evidence map›Paper›PMID 26859249›Full record

ArticleBiochemistry2016

Topologically Diverse Human Membrane Proteins Partition to Liquid-Disordered Domains in Phase-Separated Lipid Vesicles.

Jonathan P Schlebach, Paul J Barrett, Charles A Day, Ji Hun Kim, Anne K Kenworthy, Charles R Sanders

Open access · bronzeAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The Two Faces of the Liquid Ordered Phase.The journal of physical chemistry letters · 2022
    Article
  5. Ion mobility-mass spectrometry reveals the role of peripheral myelin protein dimers in peripheral neuropathy.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Peripheral myelin protein 22 preferentially partitions into ordered phase membrane domains.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Article
  8. Article
  9. Entropic forces drive clustering and spatial localization of influenza A M2 during viral budding.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  10. Membrane properties that shape the evolution of membrane enzymes.Current opinion in structural biology · 2018
    Review
  11. Phase Composition Control in Microsphere-Supported Biomembrane Systems.Langmuir : the ACS journal of surfaces and colloids · 2017
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jonathan P SchlebachDepartment of Biochemistry, ‡Center for Structural Biology, §Department of Molecular Physiology and Biophysics, ∥Department of Cell and Developmental Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37240, United States.
Paul J BarrettDepartment of Biochemistry, ‡Center for Structural Biology, §Department of Molecular Physiology and Biophysics, ∥Department of Cell and Developmental Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37240, United States.
Charles A DayDepartment of Biochemistry, ‡Center for Structural Biology, §Department of Molecular Physiology and Biophysics, ∥Department of Cell and Developmental Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37240, United States.
Ji Hun KimDepartment of Biochemistry, ‡Center for Structural Biology, §Department of Molecular Physiology and Biophysics, ∥Department of Cell and Developmental Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37240, United States.
Anne K KenworthyDepartment of Biochemistry, ‡Center for Structural Biology, §Department of Molecular Physiology and Biophysics, ∥Department of Cell and Developmental Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37240, United States.
Charles R SandersDepartment of Biochemistry, ‡Center for Structural Biology, §Department of Molecular Physiology and Biophysics, ∥Department of Cell and Developmental Biology, Vanderbilt University School of Medicine , Nashville, Tennessee 37240, United States.
Vanderbilt University · US

Funding

Project 4 (Goethe University of Frankfurt)U54GM094608 · NIGMS · HARVARD MEDICAL SCHOOL · PI CHOU, JAMES JEIWEN · 2010 to 2014
$11.5M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
Cholesterol and the Amyloid Precursor ProteinR01GM106672 · NIGMS · VANDERBILT UNIVERSITY · PI SANDERS, CHARLES R · 2013 to 2016
$1.2M
Structural Basis for the Partitioning of C99 into Liquid-Ordered Membrane DomainsF32GM110929 · NIGMS · VANDERBILT UNIVERSITY · PI SCHLEBACH, JONATHAN PATRICK · 2014 to 2015
$109k
A Structural/Functional Study on Cholesterol's Regulation of Alzheimer's DiseaseF31NS077681 · NINDS · VANDERBILT UNIVERSITY · PI BARRETT, PAUL J. · 2012 to 2013
$34k
NIGMS NIH HHS NIH F32GM110929NIGMS NIH HHS R01 GM106672NIGMS NIH HHS T32 GM008320NIGMS NIH HHS U54 GM094608NINDS NIH HHS F31 NS077681
6 · The paper itself

Abstract

The integration of membrane proteins into "lipid raft" membrane domains influences many biochemical processes. The intrinsic structural properties of membrane proteins are thought to mediate their partitioning between membrane domains. However, whether membrane topology influences the targeting of proteins to rafts remains unclear. To address this question, we examined the domain preference of three putative raft-associated membrane proteins with widely different topologies: human caveolin-3, C99 (the 99 residue C-terminal domain of the amyloid precursor protein), and peripheral myelin protein 22. We find that each of these proteins are excluded from the ordered domains of giant unilamellar vesicles containing coexisting liquid-ordered and liquid-disordered phases. Thus, the intrinsic structural properties of these three topologically distinct disease-linked proteins are insufficient to confer affinity for synthetic raft-like domains.

Indexed as

Models, MolecularAmyloid beta-Protein PrecursorCaveolin 3CholesterolFluorescent DyesHumansHydrophobic and Hydrophilic InteractionsMembrane MicrodomainsMicroscopy, ConfocalMicroscopy, FluorescenceMyelin ProteinsPeptide FragmentsPhosphatidylcholinesPhosphatidylethanolaminesProtein ConformationProtein Interaction Domains and Motifs1-palmitoyl-2-oleoylphosphatidylcholineAmyloid beta-Protein Precursoramyloid beta-protein precursor C-terminal fragment beta, humanCAV3 protein, humanCaveolin 3CholesterolFluorescent DyesMyelin ProteinsN-(lissamine rhodamine B sulfonyl)-1,2-dioleoylphosphatidylethanolaminePeptide FragmentsPhosphatidylcholinesPhosphatidylethanolaminesPMP22 protein, humanRecombinant ProteinsRhodaminesSphingomyelinsUnilamellar Liposomes

Identifiers

PMID26859249
PMCPMC4766968
OpenAlexW2268478214

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.