Evidence map›Paper›PMID 26858927›Full record

ArticleBioscience of microbiota, food and health2016

Adhesion properties of a putative polymorphic fimbrial subunit protein from Bifidobacterium longum subsp. longum.

Kenta Suzuki, Keita Nishiyama, Hiroki Miyajima, Ro Osawa, Yuji Yamamoto, Takao Mukai

Open access · diamondAbstract read
In one paragraph

Article in Bioscience of microbiota, food and health, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 26 citations in OpenAlex.

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  11. mBio · 2017
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  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kenta SuzukiDepartment of Animal Science, School of Veterinary Medicine, Kitasato University, Towada, Aomori, Japan.
Keita NishiyamaDepartment of Animal Science, School of Veterinary Medicine, Kitasato University, Towada, Aomori, Japan; Department of Microbiology, School of Pharmacy, Kitasato University, Minato-ku, Tokyo, Japan.
Hiroki MiyajimaDepartment of Animal Science, School of Veterinary Medicine, Kitasato University, Towada, Aomori, Japan.
Ro OsawaDepartment of Bioresource Science, Graduate School of Agricultural Science, Kobe University, Kobe, Japan.
Yuji YamamotoDepartment of Animal Science, School of Veterinary Medicine, Kitasato University, Towada, Aomori, Japan.
Takao MukaiDepartment of Animal Science, School of Veterinary Medicine, Kitasato University, Towada, Aomori, Japan.
Kitasato University · JPKobe University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In our previous study, we found that the open reading frame bl0675 in the genome of Bifidobacterium longum subsp. longum isolated from human feces encoded a novel putative fimbrial protein, was highly polymorphic, and had five variants (A, B, C, D, and E types). The aim of this study was to evaluate the affinity of these variants to porcine colonic mucins (PCMs). Protein-binding properties were examined using the recombinant BL0675 protein containing a C-terminal 6 × His tag (His-BL0675). Surface plasmon resonance analysis demonstrated that the His-BL0675 A type had strong affinity to PCMs (KD = 9.82 × 10(-8) M), whereas the B, C, D, and E types exhibited little or no binding. In a competitive enzyme-linked immunosorbent assay, His-BL0675 A type binding was reduced by addition of mucin oligosaccharides, suggesting that the binding occurs via carbohydrate chains of PCMs. The localization of BL0675 to the B. longum subsp. longum cell surface was confirmed by western blot analysis using A type polyclonal antibodies. Bacterial adhesion of B. longum subsp. longum to PCMs was also blocked by A type-specific antibodies; however, its adhesion properties were strain specific. Our results suggest that the BL0675 variants significantly contribute to the adhesion of B. longum subsp. longum strains. The expression and the adhesive properties of this protein are affected by genetic polymorphisms and are specific for B. longum subsp. longum strains. However, further studies are required on the properties of binding of these putative fimbrial proteins to the human gastrointestinal tract.

Indexed as

adhesionBifidobacterium longum subsp. longumfimbrial subunit proteinmucinsurface plasmon resonance

Identifiers

PMID26858927
PMCPMC4735030
OpenAlexW2175959453

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.