ArticleScientific reports2016
Development and application of a novel genome-wide SNP array reveals domestication history in soybean.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.
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88 citing papers in PubMed.
- Hyperspectral phenotyping and GWAS identify novel QTLs for soybean photosynthetic rate.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Genome-wide signatures of selection and genetic diversity reveal the impact of modern breeding on Brazilian soybean.Molecular breeding : new strategies in plant improvement · 2026Article
- Identification of nodule number-related loci and the candidate gene GmbHLH135 in soybean under low phosphorus stress.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Development of a 10K breeder-friendly SNP chip for faba bean.Frontiers in plant science · 2026Article
- When the body resonates with the pain of the other: Empathy Bodyssence in Parkinson's disease.Neuroscience of consciousness · 2026Article
- A natural variant of anProceedings of the National Academy of Sciences of the United States of America · 2025Article
- Identification of Novel Genetic Loci Related to 100-Seed Weight in the Korean Soybean Core Collection Using a Genome-Wide Association Study.International journal of molecular sciences · 2025Article
- Genome-Wide Association Analysis of Sweet Pepper (Plants (Basel, Switzerland) · 2025Article
- Identification of candidate genes and development of KASP markers for soybean pod-related traits using GWAS.Frontiers in plant science · 2025Article
- Phenotypic characterization of soybean genetic resources at multiple locations: breeding implications for enhancing environmental resilience, yield and protein content.Frontiers in plant science · 2025Article
- The Myb73-GDPD2-GA2ox1 transcriptional regulatory module confers phosphate deficiency tolerance in soybean.The Plant cell · 2024Article
- Identification of soybean mosaic virus strain SC7 resistance loci and candidate genes in soybean [Glycine max (L.) Merr.].Molecular genetics and genomics : MGG · 2024Article
- Developing an SNP dataset for efficiently evaluating soybean germplasm resources using the genome sequencing data of 3,661 soybean accessions.BMC genomics · 2024Article
- QTL mapping and genomic selection of stem and branch diameter in soybean (Frontiers in plant science · 2024Article
- QTL mapping reveals key factors related to the isoflavone contents and agronomic traits of soybean (Glycine max).BMC plant biology · 2023Article
- WGCNA and transcriptome profiling reveal hub genes for key development stage seed size/oil content between wild and cultivated soybean.BMC genomics · 2023Article
- Molecular breeding for improvement of photothermal adaptability in soybean.Molecular breeding : new strategies in plant improvement · 2023Article
- The elite variations in germplasms for soybean breeding.Molecular breeding : new strategies in plant improvement · 2023Article
- Domestication of azuki bean and soybean in Japan: From the insight of archeological and molecular evidence.Breeding science · 2023Article
- Development of SNP marker panels for genotyping by target sequencing (GBTS) and its application in soybean.Molecular breeding : new strategies in plant improvement · 2023Article
28 more citing papers are in PubMed but not listed here.
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6 authors.
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Abstract
Domestication of soybeans occurred under the intense human-directed selections aimed at developing high-yielding lines. Tracing the domestication history and identifying the genes underlying soybean domestication require further exploration. Here, we developed a high-throughput NJAU 355 K SoySNP array and used this array to study the genetic variation patterns in 367 soybean accessions, including 105 wild soybeans and 262 cultivated soybeans. The population genetic analysis suggests that cultivated soybeans have tended to originate from northern and central China, from where they spread to other regions, accompanied with a gradual increase in seed weight. Genome-wide scanning for evidence of artificial selection revealed signs of selective sweeps involving genes controlling domestication-related agronomic traits including seed weight. To further identify genomic regions related to seed weight, a genome-wide association study (GWAS) was conducted across multiple environments in wild and cultivated soybeans. As a result, a strong linkage disequilibrium region on chromosome 20 was found to be significantly correlated with seed weight in cultivated soybeans. Collectively, these findings should provide an important basis for genomic-enabled breeding and advance the study of functional genomics in soybean.
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