Evidence map›Paper›PMID 26855901›Full record

ArticleAfrican journal of laboratory medicine2013

Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience.

Peter N Fonjungo, Mulu Girma, Zenebe Melaku, Teferi Mekonen, Amilcar Tanuri, Bereket Hailegiorgis, Belete Tegbaru, Yohannes Mengistu, Aytenew Ashenafi, Wubshet Mamo and 11 more

Open access · diamondAbstract read
In one paragraph

Article in African journal of laboratory medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Diagnosis of Human Immunodeficiency Virus Infection.Clinical microbiology reviews · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 3 countries.

Peter N FonjungoCenter for Disease Control and Prevention (CDC), Addis Ababa, Ethiopia.
Mulu GirmaEthiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Zenebe MelakuICAP, Columbia University, Addis Ababa, Ethiopia.
Teferi MekonenCenter for Disease Control and Prevention (CDC), Addis Ababa, Ethiopia.
Amilcar TanuriICAP, Columbia University, Addis Ababa, Ethiopia.
Bereket HailegiorgisICAP, Columbia University, Addis Ababa, Ethiopia.
Belete TegbaruEthiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Yohannes MengistuCenter for Disease Control and Prevention (CDC), Addis Ababa, Ethiopia.
Aytenew AshenafiJohn Hopkins University, TSEHAI program, Addis Ababa, Ethiopia.
Wubshet MamoUniversity of Washington, ITECH Program, Addis Ababa, Ethiopia.
Tesfay AbrehaICAP, Columbia University, Addis Ababa, Ethiopia.
Gudetta TibessoEthiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Artur RamosCenter for Global Health, Centers for Disease Control and Prevention (CDC), Atlanta, USA.
Gonfa AyanaEthiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Richard FreemanClinton HIV/AIDS Access Initiative (CHAI), Addis Ababa, Ethiopia.
John N NkengasongCenter for Global Health, Centers for Disease Control and Prevention (CDC), Atlanta, USA.
Solomon ZewduJohn Hopkins University, TSEHAI program, Addis Ababa, Ethiopia.
Yenew KebedeCenter for Disease Control and Prevention (CDC), Addis Ababa, Ethiopia.
Almaz AbebeEthiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Thomas A KenyonCenter for Disease Control and Prevention (CDC), Addis Ababa, Ethiopia.
Tsehaynesh MesseleEthiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Ethiopian Public Health Institute · ETAddis Ababa University · ETCenter for Disease Control · TWAfrica Centres for Disease Control and Prevention · ETCenters for Disease Control and Prevention · USClinton Health Access Initiative · USColumbia University · US

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

backgroundEarly diagnosis of infants infected with HIV (EID) and early initiation of treatment significantly reduces the rate of disease progression and mortality. One of the challenges to identification of HIV-1-infected infants is availability and/or access to quality molecular laboratory facilities which perform molecular virologic assays suitable for accurate identification of the HIV status of infants.

methodWe conducted a joint site assessment and designed laboratories for the expansion of DNA polymerase chain reaction (PCR) testing based on dried blood spot (DBS) for EID in six regions of Ethiopia. Training of appropriate laboratory technologists and development of required documentation including standard operating procedures (SOPs) was carried out. The impact of the expansion of EID laboratories was assessed by the number of tests performed as well as the turn-around time.

resultsDNA PCR for EID was introduced in 2008 in six regions. From April 2006 to April 2008, a total of 2848 infants had been tested centrally at the Ethiopian Health and Nutrition Research Institute (EHNRI) in Addis Ababa, and which was then the only laboratory with the capability to perform EID; 546 (19.2%) of the samples were positive. By November 2010, EHNRI and the six laboratories had tested an additional 16 985 HIV-exposed infants, of which 1915 (11.3%) were positive. The median turn-around time for test results was 14 days (range 14-21 days).

conclusionExpansion of HIV DNA PCR testing facilities that can provide quality and reliable results is feasible in resource-limited settings. Regular supervision and monitoring for quality assurance of these laboratories is essential to maintain accuracy of testing.

Identifiers

PMID26855901
PMCPMC4740918
OpenAlexW2117045809

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.