Evidence map›Paper›PMID 26854029›Full record

ArticleNature communications2016

KRAS insertion mutations are oncogenic and exhibit distinct functional properties.

Yasmine White, Aditi Bagchi, Jessica Van Ziffle, Anagha Inguva, Gideon Bollag, Chao Zhang, Heidi Carias, David Dickens, Mignon Loh, Kevin Shannon and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  5. The Journal of biological chemistry · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Yasmine WhiteDepartment of Pediatrics, University of California, 1450 3rd St, San Francisco, California 94158, USA.
Aditi BagchiDepartment of Pediatrics, Division of Pediatric Hematology/Oncology and Bone Marrow Transplantation; Helen DeVos Children's Hospital/Spectrum Health Medical Group, 100 Michigan St, Grand Rapids, Michigan 49503, USA.
Jessica Van ZiffleDepartment of Pathology, University of California, 2340 Sutter St, San Francisco, California 94115, USA.
Anagha InguvaDepartment of Pediatrics, University of California, 1450 3rd St, San Francisco, California 94158, USA.
Gideon BollagPlexxikon Inc, 91 Bolivar Dr, Berkeley, California 94710, USA.
Chao ZhangPlexxikon Inc, 91 Bolivar Dr, Berkeley, California 94710, USA.
Heidi CariasPlexxikon Inc, 91 Bolivar Dr, Berkeley, California 94710, USA.
David DickensDepartment of Pediatrics, Division of Pediatric Hematology/Oncology and Bone Marrow Transplantation; Helen DeVos Children's Hospital/Spectrum Health Medical Group, 100 Michigan St, Grand Rapids, Michigan 49503, USA.
Mignon LohDepartment of Pediatrics, University of California, 1450 3rd St, San Francisco, California 94158, USA.
Kevin ShannonDepartment of Pediatrics, University of California, 1450 3rd St, San Francisco, California 94158, USA.
Ari J FirestoneDepartment of Pediatrics, University of California, 1450 3rd St, San Francisco, California 94158, USA.ORCID http://orcid.org/0000-0001-9902-443X
University of California, San Francisco · USUniversidad Estatal de Bolívar · ECSpectrum Health · USSutter Health · USVan Andel Institute · US

Funding

Translational Investigation of KRas & NF1 in Myeloid LeukemiaR37CA072614 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SHANNON, KEVIN M. · 2007 to 2016
$3.4M
Howard Hughes Medical InstituteNCI NIH HHS R37 CA072614NCI NIH HHS R37CA72614
6 · The paper itself

Abstract

Oncogenic KRAS mutations introduce discrete amino acid substitutions that reduce intrinsic Ras GTPase activity and confer resistance to GTPase-activating proteins (GAPs). Here we discover a partial duplication of the switch 2 domain of K-Ras encoding a tandem repeat of amino acids G60_A66dup in a child with an atypical myeloproliferative neoplasm. K-Ras proteins containing this tandem duplication or a similar five amino acid E62_A66dup mutation identified in lung and colon cancers transform the growth of primary myeloid progenitors and of Ba/F3 cells. Recombinant K-Ras(G60_A66dup) and K-Ras(E62_A66dup) proteins display reduced intrinsic GTP hydrolysis rates, accumulate in the GTP-bound conformation and are resistant to GAP-mediated GTP hydrolysis. Remarkably, K-Ras proteins with switch 2 insertions are impaired for PI3 kinase binding and Akt activation, and are hypersensitive to MEK inhibition. These studies illuminate a new class of oncogenic KRAS mutations and reveal unexpected plasticity in oncogenic Ras proteins that has diagnostic and therapeutic implications.

Indexed as

Mutagenesis, InsertionalAnimalsChild, PreschoolGTPase-Activating ProteinsHepatocytesHumansLeukemia, Myelomonocytic, JuvenileMiceMutationPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktProto-Oncogene Proteins p21(ras)Tandem Repeat SequencesTumor Stem Cell AssayGTPase-Activating ProteinsKRAS protein, humanPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktProto-Oncogene Proteins p21(ras)

Identifiers

PMID26854029
PMCPMC4748120
OpenAlexW2419186046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.