Evidence map›Paper›PMID 26850319›Full record

ArticleCell transplantation2016

Allele-Specific Reduction of the Mutant Huntingtin Allele Using Transcription Activator-Like Effectors in Human Huntington's Disease Fibroblasts.

Kyle D Fink, Peter Deng, Josh Gutierrez, Joseph S Anderson, Audrey Torrest, Anvita Komarla, Stefanos Kalomoiris, Whitney Cary, Johnathon D Anderson, William Gruenloh and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell transplantation, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Huntington's Disease: Complex Pathogenesis and Therapeutic Strategies.International journal of molecular sciences · 2024
    Review
  6. Protocol for Allele-Specific Epigenome Editing Using CRISPR/dCas9.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  7. Article
  8. Review
  9. CRISPR-Cas-mediated transcriptional modulation: The therapeutic promises of CRISPRa and CRISPRi.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Review
  10. Review
  11. CRISPR base editing of cis-regulatory elements enables the perturbation of neurodegeneration-linked genes.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Current and Possible Future Therapeutic Options for Huntington's Disease.Journal of central nervous system disease · 2022
    Review
  17. Huntington's Disease: New Frontiers in Therapeutics.Current neurology and neuroscience reports · 2021
    Review
  18. AnFrontiers in molecular neuroscience · 2021
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Kyle D FinkStem Cell Program and Institute for Regenerative Cures, University of California Davis Health Systems, Sacramento, CA, USA.
Peter Deng
Josh Gutierrez
Joseph S Anderson
Audrey Torrest
Anvita Komarla
Stefanos Kalomoiris
Whitney Cary
Johnathon D Anderson
William Gruenloh
Alexandra Duffy
Teresa Tempkin
Geralyn Annett
Vicki Wheelock
David J Segal
Jan A Nolta
California Institute for Regenerative Medicine · USUniversity of California, Davis · US

Funding

Training Program In Basic & Translational Cardiovascular ScienceT32HL086350 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Martin Cadeiras, David A. Liem · 2008 to 2026
$7.1M
MSCs engineered to produce Brain-Derived Neurotrophic Factor for the Treatment of Huntington's diseaseR01NS102486 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Kyle Fink, Jan A. Nolta · 2017 to 2026
$3.7M
Optimization of humanized mouse models using mobilized peripheral blood stem cellsR24OD021606 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ANDERSON, JOSEPH, NOLTA, JAN A. · 2017 to 2020
$2.8M
Direct cell to cell transfer of microRNA for tissue repairR01GM099688 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI NOLTA, JAN A. · 2011 to 2015
$2.7M
Training Program in Biomolecular TechnologyT32GM008799 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI LEACH, J. KENT · 2002 to 2016
$2.4M
Predoctoral Training in Pharmacological SciencesT32GM099608 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI HELL, JOHANNES W · 2012 to 2021
$2.2M
NextGen DNA Binding Proteins Based on TAL DomainsR01GM097073 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SEGAL, DAVID J · 2011 to 2014
$1.1M
Shared LSRII Cytometer Equipment Application - UC Davis Stem Cell ProgramS10RR026825 · NCRR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI NOLTA, JAN A. · 2010 to 2010
$500k
Novel epigenetic targets for silencing the Huntingtons disease mutationF32NS090722 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FINK, KYLE · 2014 to 2015
$102k
CELL SORTER FOR AN OPTICAL BIOLOGY FACILITYS10RR012964 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI LUCIW, PAUL A · 1998 to 1998
–
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR012088 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI CURRY, FITZ-ROY E · 1996 to 1996
–
NCI NIH HHS CA0933730NCRR NIH HHS C06 RR012088NCRR NIH HHS C06-RR12088NCRR NIH HHS S10 RR 026825NCRR NIH HHS S10 RR026825NCRR NIH HHS S10 RR12964NHLBI NIH HHS T32 HL086350NHLBI NIH HHS T32-HL086350NIGMS NIH HHS R01 GM097073NIGMS NIH HHS R01GM097073NIGMS NIH HHS R01 GM099688NIGMS NIH HHS R01GM099688NIGMS NIH HHS T32 GM008799NIGMS NIH HHS T32-GM008799NIGMS NIH HHS T32 GM099608NIGMS NIH HHS T32GM099608NIH HHS R24 OD021606NINDS NIH HHS F32 NS090722NINDS NIH HHS F32NS090722NINDS NIH HHS R01 NS102486
6 · The paper itself

Abstract

Huntington's disease (HD) is an autosomal dominant neurodegenerative disorder caused by an abnormal expansion of CAG repeats. Although pathogenesis has been attributed to this polyglutamine expansion, the underlying mechanisms through which the huntingtin protein functions have yet to be elucidated. It has been suggested that postnatal reduction of mutant huntingtin through protein interference or conditional gene knockout could prove to be an effective therapy for patients suffering from HD. For allele-specific targeting, transcription activator-like effectors (TALE) were designed to target single-nucleotide polymorphisms (SNP) in the mutant allele and packaged into a vector backbone containing KRAB to promote transcriptional repression of the disease-associated allele. Additional TALEs were packaged into a vector backbone containing heterodimeric FokI and were designed to be used as nucleases (TALEN) to cause a CAG-collapse in the mutant allele. Human HD fibroblasts were treated with each TALE-SNP or TALEN. Allele-expression was measured using a SNP-genotyping assay and mutant protein aggregation was quantified with Western blots for anti-ubiquitin. The TALE-SNP and TALEN significantly reduced mutant allele expression (p < 0.05) when compared to control transfections while not affecting expression of the nondisease allele. This study demonstrates the potential of allele-specific gene modification using TALE proteins, and provides a foundation for targeted treatment for individuals suffering from Huntington's or other genetically linked diseases.

Indexed as

AllelesHuntingtin ProteinHuntington DiseasePolymorphism, Single NucleotideTranscriptional ActivationFemaleFibroblastsGene Knockdown TechniquesHumansMaleHTT protein, humanHuntingtin Protein

Identifiers

PMID26850319
PMCPMC6476541
OpenAlexW2411284065

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.