ArticlePlant physiology2016
A Co-Opted Hormonal Cascade Activates Dormant Adventitious Root Primordia upon Flooding in Solanum dulcamara.
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Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.
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52 citing papers in PubMed, 113 citations in OpenAlex.
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- An overview of low-oxygen sensing and flooding responses of tomato.Journal of experimental botany · 2025Review
- Identification of Quantitative Trait Loci and Candidate Genes Involved in Rice Seedling Growth Under Hypoxic Stress.International journal of molecular sciences · 2025Article
- Decoding plant responses to waterlogging: from stress signals to molecular mechanisms and their future implications.Plant molecular biology · 2025Review
- Silicon: A valuable soil element for improving plant growth and COJournal of advanced research · 2025Review
- CmHRE2L-CmACS6 transcriptional cascade negatively regulates waterlogging tolerance in Chrysanthemum.Molecular horticulture · 2025Article
- Integrated metabolomic and transcriptomic strategies to reveal adaptive mechanisms in barley plant during germination stage under waterlogging stress.Journal of plant research · 2025Article
- Physiological and Multi-Omics Integrative Analysis Provides New Insights into Tolerance to Waterlogging Stress in Sesame (International journal of molecular sciences · 2025Article
- Multi-omic analyses reveal the waterlogging induced responses inFrontiers in plant science · 2025Article
- The role of ethylene in the regulation of plant response mechanisms to waterlogging stress.Plant cell reports · 2024Review
- RNA-seq-based comparative transcriptome analysis reveals the role ofHorticulture research · 2024Article
- Looking for Resistance to Soft Rot Disease of Potatoes Facing Environmental Hypoxia.International journal of molecular sciences · 2024Review
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- The effect of exogenous melatonin on waterlogging stress inFrontiers in plant science · 2024Article
- Plant Adaptation to Flooding Stress under Changing Climate Conditions: Ongoing Breakthroughs and Future Challenges.Plants (Basel, Switzerland) · 2023Review
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- Oxygenation alleviates waterlogging-caused damages to cherry rootstocks.Molecular horticulture · 2023Article
- Exploring the Potential of Multiomics and Other Integrative Approaches for Improving Waterlogging Tolerance in Plants.Plants (Basel, Switzerland) · 2023Review
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Authors and funding
11 authors at 1 institution in 2 countries.
Thikra DawoodDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).
Xinping YangDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).ORCID 0000-0001-8661-8802
Eric J W VisserDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).ORCID 0000-0002-4763-3775
Tim A H Te BeekDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).ORCID 0000-0001-5368-9743
Philip R KenscheDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).
Simona M CristescuDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).
Sangseok LeeDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).ORCID 0000-0001-7112-4447
Kristýna FlokováDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).ORCID 0000-0002-5558-0669
Duy NguyenDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).ORCID 0000-0001-6420-7308
Celestina MarianiDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.).
Ivo RieuDepartment of Molecular Plant Physiology, Institute for Water and Wetland Research (T.D., X.Y., D.N., C.M., I.R.), Department of Experimental Plant Ecology, Institute for Water and Wetland Research (E.J.W.V.), Center for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences (P.R.K.), and Department of Molecular and Laser Physics, Institute for Molecules and Materials (S.M.C.), Radboud University, 6500 GL Nijmegen, The Netherlands;Netherlands Bioinformatics Centre, 6525 GA Nijmegen, The Netherlands (T.A.H.t.B.);Laboratory of Plant Physiology, Plant Sciences, Wageningen University, 6708 PB Wageningen, The Netherlands (S.L., K.F.); andGyeongsangbuk-Do Agricultural Research and Extension Services, 136 Gil-14, Chilgokiungang-Daero, Daegu, South Korea (S.L.) i.rieu@science.ru.nl.ORCID 0000-0001-8575-0959
Radboud University Nijmegen · NL
Funding
No grant is acknowledged in the PubMed record.
Abstract
Soil flooding is a common stress factor affecting plants. To sustain root function in the hypoxic environment, flooding-tolerant plants may form new, aerenchymatous adventitious roots (ARs), originating from preformed, dormant primordia on the stem. We investigated the signaling pathway behind AR primordium reactivation in the dicot species Solanum dulcamara Transcriptome analysis indicated that flooding imposes a state of quiescence on the stem tissue, while increasing cellular activity in the AR primordia. Flooding led to ethylene accumulation in the lower stem region and subsequently to a drop in abscisic acid (ABA) level in both stem and AR primordia tissue. Whereas ABA treatment prevented activation of AR primordia by flooding, inhibition of ABA synthesis was sufficient to activate them in absence of flooding. Together, this reveals that there is a highly tissue-specific response to reduced ABA levels. The central role for ABA in the response differentiates the pathway identified here from the AR emergence pathway known from rice (Oryza sativa). Flooding and ethylene treatment also induced expression of the polar auxin transporter PIN2, and silencing of this gene or chemical inhibition of auxin transport inhibited primordium activation, even though ABA levels were reduced. Auxin treatment, however, was not sufficient for AR emergence, indicating that the auxin pathway acts in parallel with the requirement for ABA reduction. In conclusion, adaptation of S. dulcamara to wet habitats involved co-option of a hormonal signaling cascade well known to regulate shoot growth responses, to direct a root developmental program upon soil flooding.
Indexed as
FloodsAbscisic AcidBiological TransportEthylenesGene Expression Regulation, PlantIndoleacetic AcidsOrgan SpecificityPlant Growth RegulatorsPlant ProteinsPlant RootsSignal TransductionSolanumTranscriptomeAbscisic AcidethyleneEthylenesIndoleacetic AcidsPlant Growth RegulatorsPlant Proteins
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