Evidence map›Paper›PMID 26850157›Full record

ArticleFEMS microbiology ecology2016

Evidence for plasmid-mediated salt tolerance in the human gut microbiome and potential mechanisms.

Eileen Broaders, Ciarán O'Brien, Cormac G M Gahan, Julian R Marchesi

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Multidrug-resistant enterobacteriaceae in coastal water: an emerging threat.Antimicrobial resistance and infection control · 2020
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Eileen BroadersAlimentary Pharmabiotic Centre, University College Cork, College Road, Cork, T12 YT20, Ireland Department of Microbiology, University College Cork, College Road, Cork, T12 YT20, Ireland.
Ciarán O'BrienDepartment of Microbiology, University College Cork, College Road, Cork, T12 YT20, Ireland.
Cormac G M GahanAlimentary Pharmabiotic Centre, University College Cork, College Road, Cork, T12 YT20, Ireland Department of Microbiology, University College Cork, College Road, Cork, T12 YT20, Ireland School of Pharmacy, University College Cork, Cork, T12 YT20, Ireland.
Julian R MarchesiAlimentary Pharmabiotic Centre, University College Cork, College Road, Cork, T12 YT20, Ireland School of Biosciences, Cardiff University, Cardiff CF103AX, UK Centre for Digestive and Gut Health, Imperial College London, London W2 1NY, UK marchesijr@cardiff.ac.uk.
University College Cork · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human gut microbiome is critical to health and wellbeing. It hosts a complex ecosystem comprising a multitude of bacterial species, which contributes functionality that would otherwise be absent from the host. Transient and commensal bacteria in the gut must withstand many stresses. The influence of mobile genetic elements such as plasmids in stress adaptation within the ecosystem is poorly understood. Using a mobilomic approach we found evidence for plasmid-mediated osmotolerance as a phenotype amongst the Proteobacteria in healthy faecal slurries. A transconjugant carrying multiple plasmids acquired from healthy faecal slurry demonstrated increased osmotolerance in the presence of metal salts, particularly potassium chloride, which was not evident in the recipient. Pyrosequencing and analysis of the total plasmid DNA demonstrated the presence of plasmid-borne osmotolerance systems (including KdpD and H-NS) which may be linked to the observed phenotype. This is the first report of a transferable osmotolerance phenotype in gut commensals and may have implications for the transfer of osmotolerance in other niches.

Indexed as

Gastrointestinal MicrobiomeBacteriaFecesHumansPlasmidsSalt ToleranceSodium ChlorideSodium Chloridegutmicrobiomemobile genetic elementsosmotolerance

Identifiers

PMID26850157
PMCPMC5831011
OpenAlexW2267957258

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.