ArticleThe ISME journal2016
Contributions of ancestral inter-species recombination to the genetic diversity of extant Streptomyces lineages.
Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 39 citations in OpenAlex.
- Considering internal conflict in the face of natural product biosynthesis and biosynthetic gene cluster evolution.Essays in biochemistry · 2026Review
- Virome analysis uncovers the tomato virosphere and a novel recombinant begomovirus-alphasatellite complex causing leaf curl disease in India.BMC plant biology · 2026Article
- Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth.PLoS biology · 2025Article
- Strain tracking in complex microbiomes using synteny analysis reveals per-species modes of evolution.Nature biotechnology · 2025Article
- Net rate of lateral gene transfer in marine prokaryoplankton.The ISME journal · 2025Article
- Genetic Diversity and Functional Potential of Streptomyces spp. Isolated from Pachmarhi Biosphere Reserve, India.Current microbiology · 2024Article
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- Article
- A panoramic view of the genomic landscape of the genusMicrobial genomics · 2023Article
- Genetic Diversity and Anti-Oxidative Potential of Streptomyces spp. Isolated from Unexplored Niches of Meghalaya, India.Current microbiology · 2022Article
- Great diversity of KSFEMS microbes · 2022Article
- Elevational Gradients Impose Dispersal Limitation onFrontiers in microbiology · 2022Article
- Ecology and genomics of Actinobacteria: new concepts for natural product discovery.Nature reviews. Microbiology · 2020Review
- Genome mining of biosynthetic and chemotherapeutic gene clusters in Streptomyces bacteria.Scientific reports · 2020Article
- Population Genomics Insights into Adaptive Evolution and Ecological Differentiation in Streptomycetes.Applied and environmental microbiology · 2019Article
- Within-Species Genomic Variation and Variable Patterns of Recombination in the Tetracycline ProducerFrontiers in microbiology · 2019Article
- Exclusivity offers a sound yet practical species criterion for bacteria despite abundant gene flow.BMC genomics · 2018Article
- Phylogenetic conservatism of thermal traits explains dispersal limitation and genomic differentiation of Streptomyces sister-taxa.The ISME journal · 2018Article
- Phylogenomic Insight into Salinispora (Bacteria, Actinobacteria) Species Designations.Scientific reports · 2017Article
- Genetic Stability and Evolution of theApplied and environmental microbiology · 2017Article
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Streptomyces species produce many important antibiotics and have a crucial role in soil nutrient cycling. However, their evolutionary history remains poorly characterized. We have evaluated the impact of homologous recombination on the evolution of Streptomyces using multi-locus sequence analysis of 234 strains that represent at least 11 species clusters. Evidence of inter-species recombination is widespread but not uniform within the genus and levels of mosaicism vary between species clusters. Most phylogenetically incongruent loci are monophyletic at the scale of species clusters and their subclades, suggesting that these recombination events occurred in shared ancestral lineages. Further investigation of two mosaic species clusters suggests that genes acquired by inter-species recombination may have become fixed in these lineages during periods of demographic expansion; implicating a role for phylogeography in determining contemporary patterns of genetic diversity. Only by examining the phylogeny at the scale of the genus is apparent that widespread phylogenetically incongruent loci in Streptomyces are derived from a far smaller number of ancestral inter-species recombination events.
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