ArticlePloS one2016
Gene Structures, Evolution and Transcriptional Profiling of the WRKY Gene Family in Castor Bean (Ricinus communis L.).
Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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25 citing papers in PubMed, 56 citations in OpenAlex.
- Genome-wide identification of the WRKY transcription factors family and regulation of metabolites under cold stress in Astragalus membranaceus.BMC plant biology · 2025Article
- Transcriptome analysis and genome-wide identification of WRKY gene family in Leonurus japonicus under drought stress.BMC plant biology · 2025Article
- The WRKY gene family in the halophyte Limonium bicolor: identification, expression analysis, and regulation of salt stress tolerance.Plant cell reports · 2024Article
- Genome-wide identification of WRKY transcription factor family members in Miscanthus sinensis (Miscanthus sinensis Anderss).Scientific reports · 2024Article
- The role of WRKY transcription factors in exogenous potassium (KFrontiers in genetics · 2023Article
- Genome-Wide Identification and Characterization of the WRKY Gene Family inInternational journal of molecular sciences · 2022Article
- Identification of WRKY transcription factors involved in regulating the biosynthesis of the anti-cancer drug camptothecin inHorticulture research · 2022Article
- Article
- Genome-Wide Identification and Transcriptional Expression Profiles of Transcription FactorGenes · 2021Article
- Identification of the Group IIIPlants (Basel, Switzerland) · 2021Article
- Genome-wide identification and functional characterization of the Camelina sativa WRKY gene family in response to abiotic stress.BMC genomics · 2020Article
- WRKY genes family study reveals tissue-specific and stress-responsive TFs in wild potato species.Scientific reports · 2020Article
- Genome-wide Identification of WRKY transcription factor family members in sorghum (Sorghum bicolor (L.) moench).PloS one · 2020Article
- Genome-wide identification and expression analysis of the phosphatase 2A family in rubber tree (Hevea brasiliensis).PloS one · 2020Article
- Genome-wide identification and expression analyses of WRKY transcription factor family members from chickpea (Cicer arietinum L.) reveal their role in abiotic stress-responses.Genes & genomics · 2019Article
- WRKYs, the Jack-of-various-Trades, Modulate Dehydration Stress in Populus davidiana-A Transcriptomic Approach.International journal of molecular sciences · 2019Article
- Article
- Article
- Association of transcription factorPeerJ · 2019Article
- Identification ofInternational journal of molecular sciences · 2018Article
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
WRKY proteins comprise one of the largest transcription factor families in plants and form key regulators of many plant processes. This study presents the characterization of 58 WRKY genes from the castor bean (Ricinus communis L., Euphorbiaceae) genome. Compared with the automatic genome annotation, one more WRKY-encoding locus was identified and 20 out of the 57 predicted gene models were manually corrected. All RcWRKY genes were shown to contain at least one intron in their coding sequences. According to the structural features of the present WRKY domains, the identified RcWRKY genes were assigned to three previously defined groups (I-III). Although castor bean underwent no recent whole-genome duplication event like physic nut (Jatropha curcas L., Euphorbiaceae), comparative genomics analysis indicated that one gene loss, one intron loss and one recent proximal duplication occurred in the RcWRKY gene family. The expression of all 58 RcWRKY genes was supported by ESTs and/or RNA sequencing reads derived from roots, leaves, flowers, seeds and endosperms. Further global expression profiles with RNA sequencing data revealed diverse expression patterns among various tissues. Results obtained from this study not only provide valuable information for future functional analysis and utilization of the castor bean WRKY genes, but also provide a useful reference to investigate the gene family expansion and evolution in Euphorbiaceus plants.
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