Evidence map›Paper›PMID 26848988›Full record

ArticleBiochemistry2016

Dramatic Domain Rearrangements of the Cyanobacterial Orange Carotenoid Protein upon Photoactivation.

Haijun Liu, Hao Zhang, Gregory S Orf, Yue Lu, Jing Jiang, Jeremy D King, Nathan R Wolf, Michael L Gross, Robert E Blankenship

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 72 citations in OpenAlex.

  1. Atomistic simulations reveal the photoactivation mechanism of a carotenoid-binding photoreceptor.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  8. A favorable path to domain separation in the orange carotenoid protein.Protein science : a publication of the Protein Society · 2022
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  20. Photoactivation mechanism of a carotenoid-based photoreceptor.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Haijun LiuDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Hao ZhangDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Gregory S OrfDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Yue LuDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Jing JiangDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Jeremy D KingDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Nathan R WolfDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Michael L GrossDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Robert E BlankenshipDepartment of Biology, ‡Photosynthetic Antenna Research Center (PARC), and §Department of Chemistry, Washington University in St. Louis , St. Louis, Missouri 63130, United Sates.
Washington University in St. Louis · US

Funding

TrainingP41GM103422 · NIGMS · WASHINGTON UNIVERSITY · PI YARASHESKI, KEVIN E · 2012 to 2019
$12.0M
NIGMS NIH HHS 2P41GM103422NIGMS NIH HHS P41 GM103422
6 · The paper itself

Abstract

Photosynthetic cyanobacteria make important contributions to global carbon and nitrogen budgets. A protein known as the orange carotenoid protein (OCP) protects the photosynthetic apparatus from damage by dissipating excess energy absorbed by the phycobilisome, the major light-harvesting complex in many cyanobacteria. OCP binds one carotenoid pigment, but the color of this pigment depends on conditions. It is orange in the dark and red when exposed to light. We modified the orange and red forms of OCP by using isotopically coded cross-linking agents and then analyzed the structural features by using liquid chromatography and tandem mass spectrometry. Unequivocal cross-linking pairs uniquely detected in red OCP indicate that, upon photoactivation, the OCP N-terminal domain (NTD) and C-terminal domain (CTD) reorient relative to each other. Our data also indicate that the intrinsically unstructured loop connecting the NTD and CTD not only is involved in the interaction between the two domains in orange OCP but also, together with the N-terminal extension, provides a structural buffer system facilitating an intramolecular breathing motion of the OCP, thus helping conversion back and forth from the orange to red form during the OCP photocycle. These results have important implications for understanding the molecular mechanism of action of cyanobacterial photoprotection.

Indexed as

Models, MolecularBacterial ProteinsCarotenoidsChromatography, High Pressure LiquidCross-Linking ReagentsDimerizationLigandsLightMolecular WeightPeptide MappingPhotochemical ProcessesProtein RefoldingProtein Structure, TertiarySynechocystisTandem Mass SpectrometryBacterial ProteinsCarotenoidsCross-Linking ReagentsLigandsorange carotenoid protein, Synechocystis

Identifiers

PMID26848988
PMCPMC5201194
OpenAlexW2267693776

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.