Evidence map›Paper›PMID 26848530›Full record

ArticleOncotarget2016

Human plasma metabolomics for identifying differential metabolites and predicting molecular subtypes of breast cancer.

Yong Fan, Xin Zhou, Tian-Song Xia, Zhuo Chen, Jin Li, Qun Liu, Raphael N Alolga, Yan Chen, Mao-De Lai, Ping Li and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 99 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Omics Technologies Improving Breast Cancer Research and Diagnostics.International journal of molecular sciences · 2023
    Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yong FanState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Xin ZhouDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Tian-Song XiaDepartment of Breast Surgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Zhuo ChenState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Jin LiState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Qun LiuState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Raphael N AlolgaState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Yan ChenEmergency Center, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Mao-De LaiState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Ping LiState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
Wei ZhuDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China.
Lian-Wen QiState Key Laboratory of Natural Medicines, China Pharmaceutical University, Nanjing 210009, China.
China Pharmaceutical University · CNJiangsu Province Hospital · CNNanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThis work aims to identify differential metabolites and predicting molecular subtypes of breast cancer (BC).

methodsPlasma samples were collected from 96 BC patients and 79 normal participants. Metabolic profiles were determined by liquid chromatography-mass spectrometry and gas chromatography-mass spectrometry based on multivariate statistical data analysis.

resultsWe observed 64 differential metabolites between BC and normal group. Compared to human epidermal growth factor receptor 2 (HER2)-negative patients, HER2-positive group showed elevated aerobic glycolysis, gluconeogenesis, and increased fatty acid biosynthesis with reduced Krebs cycle. Compared with estrogen receptor (ER)-negative group, ER-positive patients showed elevated alanine, aspartate and glutamate metabolism, decreased glycerolipid catabolism, and enhanced purine metabolism. A panel of 8 differential metabolites, including carnitine, lysophosphatidylcholine (20:4), proline, alanine, lysophosphatidylcholine (16:1), glycochenodeoxycholic acid, valine, and 2-octenedioic acid, was identified for the classification of BC subtypes. These markers showed potential diagnostic value with average area under the curve at 0.925 (95% CI 0.867-0.983) for the training set (n=51) and 0.893 (95% CI 0.847-0.939) for the test set (n=45).

conclusionHuman plasma metabolomics is useful in identifying differential metabolites and predicting breast cancer subtypes.

Indexed as

MetabolomeAdultAgedAged, 80 and overBiomarkers, TumorBreast NeoplasmsChromatography, LiquidErb-b2 Receptor Tyrosine KinasesFemaleGas Chromatography-Mass SpectrometryHumansMass SpectrometryMetabolomicsMiddle AgedMultivariate AnalysisPrognosisBiomarkers, TumorERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesReceptors, Estrogenbreast cancerdifferential metaboliteshuman plasma metabolomicsmolecular subtypes

Identifiers

PMID26848530
PMCPMC4891093
OpenAlexW2290653689

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.