Evidence map›Paper›PMID 26848019›Full record

ArticleJAMA ophthalmology2016

Precision Medicine: Personalized Proteomics for the Diagnosis and Treatment of Idiopathic Inflammatory Disease.

Gabriel Velez, C Nathaniel Roybal, Diana Colgan, Stephen H Tsang, Alexander G Bassuk, Vinit B Mahajan

Open access · bronzeAbstract read
In one paragraph

Article in JAMA ophthalmology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Psoriasis and uveitis.International ophthalmology · 2022
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Applications of artificial intelligence and bioinformatics methodologies in the analysis of ocular biofluid markers: a scoping review.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Article
  6. Liquid Biopsy Proteomics in Ophthalmology.Journal of proteome research · 2024
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Interleukins and cytokine biomarkers in uveitis.Indian journal of ophthalmology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Gabriel VelezOmics Laboratory, University of Iowa Carver College of Medicine, Iowa City2Department of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City3Medical Scientist Training Program, University of Iowa Carver College of M.
C Nathaniel RoybalOmics Laboratory, University of Iowa Carver College of Medicine, Iowa City2Department of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City.
Diana ColganOmics Laboratory, University of Iowa Carver College of Medicine, Iowa City2Department of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City.
Stephen H TsangBarbara and Donald Jonas Laboratory of Stem Cells and Regenerative Medicine and Bernard and Shirlee Brown Glaucoma Laboratory, Edward S. Harkness Eye Institute, Columbia University, New York, New York5Department of Pathology and Cell Biology, College of P.
Alexander G BassukDepartment of Pediatrics, University of Iowa Carver College of Medicine, Iowa City.
Vinit B MahajanOmics Laboratory, University of Iowa Carver College of Medicine, Iowa City2Department of Ophthalmology and Visual Sciences, University of Iowa Carver College of Medicine, Iowa City.
University of Iowa · USColumbia University · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Parisa Tehranifar · 1985 to 2026
$115.3M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
Instrumentation, Fabrication, and Design CoreP30EY019007 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Xin Zhang · 2010 to 2026
$12.9M
Toward mechanism- and gene-based therapies for retinal degenerationR01EY018213 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Stephen H Tsang · 2008 to 2026
$6.6M
Gene Silencing and Gene Editing in PhototransductionR01EY024698 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Stephen H Tsang · 2015 to 2026
$4.7M
Molecular Genetics of Age Related Macular DegenerationR01EY016822 · NEI · UNIVERSITY OF IOWA · PI STONE, EDWIN M · 2005 to 2013
$4.0M
Molecular Genetics of Dominant Neovascular Inflammatory VitreoretinopathyK08EY020530 · NEI · UNIVERSITY OF IOWA · PI MAHAJAN, VINIT B · 2011 to 2015
$1.1M
NCI NIH HHS 5P30CA013696NCI NIH HHS P30 CA013696NEI NIH HHS 5P30EY019007NEI NIH HHS K08 EY020530NEI NIH HHS K08EY020530NEI NIH HHS P30 EY019007NEI NIH HHS R01 EY016822NEI NIH HHS R01EY016822NEI NIH HHS R01 EY018213NEI NIH HHS R01EY018213NEI NIH HHS R01 EY024698NEI NIH HHS R01EY024698NIGMS NIH HHS T32 GM007337NIGMS NIH HHS T32GM007337
6 · The paper itself

Abstract

importanceTo better characterize posterior uveitis, vitreous samples from 15 patients were subjected to antibody arrays, and the expression levels of 200 human cytokines were evaluated. Expression was analyzed by 1-way analysis of variance (significance at P < .01), unsupervised cluster algorithm, and pathway analysis. OBSERVATIONS: Unbiased clustering of patients, based on their cytokine expression profile, suggested that particular protein networks and molecular pathways are altered in various forms of uveitis. Expression of interleukin 23 (IL-23), IL-1 receptor I (IL-1RI), IL-17R, tissue inhibitors of metalloproteinase 1 and 2 (TIMP-1 and TIMP-2), insulinlike growth factor-binding protein 2 (IGFBP-2), nerve growth factor (b-NGF), platelet-derived growth factor receptor β polypeptide (PDGFRb), bone morphogenic protein 4 (BMP-4), and stem cell factor (SCF) constituted a common cytokine signature in the vitreous of patients with uveitis. In 1 patient with progressive, idiopathic visual loss, this last-line analysis implicated retinal autoimmunity, a diagnosis that was validated when her serum sample was found to contain antibodies to S-arrestin, a retinal protein and potent cause of autoimmune retinal degeneration. CONCLUSIONS AND RELEVANCE: The analysis identifies a common cytokine signature for posterior uveitis and guides the diagnosis of a patient with idiopathic uveitis. Personalized treatment reversed the visual loss, illustrating how proteomic tools may individualize therapy.

Indexed as

Adrenal Cortex HormonesAdultAnalysis of VarianceCase-Control StudiesCytokinesFollow-Up StudiesHumansImmunosuppressive AgentsMaleMiddle AgedPrecision MedicineProteomicsReference ValuesRisk AssessmentSeverity of Illness IndexTreatment OutcomeAdrenal Cortex HormonesCytokinesImmunosuppressive Agents

Identifiers

PMID26848019
PMCPMC4833518
OpenAlexW2326035963

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.