Evidence map›Paper›PMID 26842001›Full record

Trial reportJournal of biomedical science2016

Fanconi anemia genes in lung adenocarcinoma- a pathway-wide study on cancer susceptibility.

Shi-Yi Yang, Chia-Ni Hsiung, Yao-Jen Li, Gee-Chen Chang, Ying-Huang Tsai, Kuan-Yu Chen, Ming-Shyan Huang, Wu-Chou Su, Yuh-Min Chen, Chao A Hsiung and 6 more

Open access · diamondAbstract readMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in Journal of biomedical science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 1 country.

Shi-Yi YangGenomics Research Center, Taipei, Taiwan. yangsyswim@gmail.com.
Chia-Ni HsiungInstitute of Biomedical Sciences, Taipei, Taiwan. chiani@ibms.sinica.edu.tw.
Yao-Jen LiGraduate Institute of Epidemiology, College of Public Health, National Taiwan University, Taipei, Taiwan. d95842003@ntu.edu.tw.
Gee-Chen ChangDivision of Chest Medicine, Department of Internal Medicine, Taichung Veterans General Hospital, Taichung, Taiwan. august@vghtc.gov.tw.
Ying-Huang TsaiDepartment of Pulmonary and Critical Care, Chang Gung Memorial Hospital, Lincou, Taiwan. chestmed@cgms.org.tw.
Kuan-Yu ChenDepartment of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan. tuff.chen@msa.hinet.net.
Ming-Shyan HuangDepartment of Internal Medicine, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan. shyang@kmu.edu.tw.
Wu-Chou SuDepartment of Internal Medicine, National Cheng Kung University Hospital and College of Medicine, Tainan, Taiwan. sunnysu@mail.ncku.edu.tw.
Yuh-Min ChenChest Department, Taipei Veterans General Hospital, Taipei, Taiwan. ymchen@vghtpe.gov.tw.
Chao A HsiungDivision of Biostatistics and Bioinformatics, Institute of Population Health Sciences, National Health Research Institutes, Zhunan, Taiwan. hsiung@nhri.org.tw.
Pan-Chyr YangDepartment of Internal Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan. pcyang@ntu.edu.tw.
Chien-Jen ChenGenomics Research Center, Taipei, Taiwan. chencj@gate.sinica.edu.tw.
Pei-Ei WuInstitute of Biomedical Sciences, Taipei, Taiwan. peiei@gate.sinica.edu.tw.
Jyh-Cherng YuDivision of General Surgery, Department of Surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan. doc20106@ndmctsgh.edu.tw.
Chen-Yang ShenInstitute of Biomedical Sciences, Taipei, Taiwan. bmcys@ibms.sinica.edu.tw.
Huan-Ming HsuDivision of General Surgery, Department of Surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan. hmh0823@gmail.com.
National Health Research Institutes · TWNational Taiwan University · TWNational Taiwan University Hospital · TWTri-Service General Hospital · TWChang Gung Memorial Hospital · TWGenomics Research Center, Academia Sinica · TWKaohsiung Medical University · TWNational Cheng Kung University Hospital · TWTaichung Veterans General Hospital · TWTaipei Veterans General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCarcinogens in cigarette smoke can induce the formation of DNA-DNA cross-links, which are repaired by the Fanconi anemia (FA) pathway, and it is tempting to speculate that this pathway is involved in lung tumorigenesis. This study is to determine whether genetic polymorphism of the FA genes is associated with an elevated risk of lung adenocarcinoma, and whether the association between genotypes and risk is modified by exposure to cigarette smoke.

methodsThis case-control study genotyped 53 single-nucleotide polymorphisms (SNPs) in FA genes in 709 patients (354 males and 355 females) with lung adenocarcinoma and in 726 cancer-free individuals (339 males and 387 females). Genotypic frequencies of SNPs were compared between cases and controls to identify important FA genes associated with cancer susceptibility. Joint effects in determining cancer risk contributed by genes and smoking-related risk factors and by multiple genes involved in different FA subpathways were evaluated by multivariate regression analysis and stratified analysis. All analyses were performed on males and females separately, and the comparison of results was considered a way of examining the validity of study findings.

resultsLung adenocarcinomas in both male and female patients were associated with (a) genotypic polymorphisms of FANCC and FANCD1; (b) a combined effect of harboring a higher number of high-risk genotypes and smoking/passive smoking; (c) specific interactions of multiple genes, proteins encoded by which have been known to work jointly within the FA pathway.

conclusionsGenetic polymorphism of the FA genes is associated with inter-individual susceptibility to lung adenocarcinoma.

Indexed as

Genetic Predisposition to DiseasePolymorphism, GeneticAdenocarcinomaBRCA2 ProteinFanconi Anemia Complementation Group C ProteinFemaleHumansLung NeoplasmsMaleBRCA2 ProteinBRCA2 protein, humanFANCC protein, humanFanconi Anemia Complementation Group C Protein

Identifiers

PMID26842001
PMCPMC4739091
OpenAlexW2254663250

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.