Evidence map›Paper›PMID 26841024›Full record

ArticlePloS one2016

iTRAQ-Based Quantitative Proteomic Analysis of Cotton Roots and Leaves Reveals Pathways Associated with Salt Stress.

Tingting Chen, Lei Zhang, Haihong Shang, Shaodong Liu, Jun Peng, Wankui Gong, Yuzhen Shi, Siping Zhang, Junwen Li, Juwu Gong and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
25.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
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  6. Biochemical Characterization of HalotolerantPlants (Basel, Switzerland) · 2022
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  14. Physiological and Proteomic Responses of Mulberry Trees (International journal of molecular sciences · 2019
    Article
  15. Article
  16. Article
  17. Article
  18. Identification of Early Salinity Stress-Responsive Proteins inInternational journal of molecular sciences · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Tingting ChenState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Lei ZhangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Haihong ShangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Shaodong LiuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Jun PengState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Wankui GongState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Yuzhen ShiState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Siping ZhangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Junwen LiState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Juwu GongState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Qun GeState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Aiying LiuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Huijuan MaState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Xinhua ZhaoState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
Youlu YuanState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, P. R. China.
State Key Laboratory of Cotton BiologyCotton Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salinity is a major abiotic stress that affects plant growth and development. In this study, we performed a proteomic analysis of cotton roots and leaf tissue following exposure to saline stress. 611 and 1477 proteins were differentially expressed in the roots and leaves, respectively. In the roots, 259 (42%) proteins were up-regulated and 352 (58%) were down-regulated. In the leaves, 748 (51%) proteins were up-regulated and 729 (49%) were down-regulated. On the basis of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, we concluded that the phenylalanine metabolism and starch and sucrose metabolism were active for energy homeostasis to cope with salt stress in cotton roots. Moreover, photosynthesis, pyruvate metabolism, glycolysis / gluconeogenesis, carbon fixation in photosynthetic organisms and phenylalanine metabolism were inhabited to reduce energy consumption. Characterization of the signaling pathways will help elucidate the mechanism activated by cotton in response to salt stress.

Indexed as

Gene Expression Regulation, PlantOsmotic PressureGossypiumPlant LeavesPlant ProteinsPlant RootsProteomicsPlant Proteins

Identifiers

PMID26841024
PMCPMC4739606
OpenAlexW2264065404

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.