Evidence map›Paper›PMID 26834123›Full record

ArticleAmerican journal of clinical pathology2016

Maternal T-Cell Engraftment Interferes With Human Leukocyte Antigen Typing in Severe Combined Immunodeficiency.

Chang Liu, Brian Duffy, Jeffrey J Bednarski, Cecelia Calhoun, Lindsay Lay, Barrett Rundblad, Jacqueline E Payton, Thalachallour Mohanakumar

Abstract readCase Reports
In one paragraph

Article in American journal of clinical pathology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chang LiuFrom the Division of Laboratory and Genomic Medicine, Department of Pathology and Immunology HLA Laboratory.
Brian DuffyHLA Laboratory.
Jeffrey J BednarskiDepartment of Pediatrics, and.
Cecelia CalhounDepartment of Pediatrics, and.
Lindsay LayMolecular Diagnostic Laboratory, Barnes-Jewish Hospital, St Louis, MO.
Barrett RundbladMolecular Diagnostic Laboratory, Barnes-Jewish Hospital, St Louis, MO.
Jacqueline E PaytonFrom the Division of Laboratory and Genomic Medicine, Department of Pathology and Immunology Molecular Diagnostic Laboratory, Barnes-Jewish Hospital, St Louis, MO.
Thalachallour MohanakumarFrom the Division of Laboratory and Genomic Medicine, Department of Pathology and Immunology HLA Laboratory Department of Surgery, Washington University School of Medicine, St Louis, MO; and\

Funding

Training Program in Development HematologyT32HD007499 · NICHD · WASHINGTON UNIVERSITY · PI RUBIN, JOSHUA B · 1999 to 2019
$2.3M
INTEGRATION OF DNA DAMAGE RESPONSES WITH IMMUNE DEVELOPMENT AND FUNCTIONK08AI102946 · NIAID · WASHINGTON UNIVERSITY · PI BEDNARSKI, JEFFREY J · 2012 to 2016
$634k
NIAID NIH HHS K08 AI102946NICHD NIH HHS T32 HD007499
6 · The paper itself

Abstract

objectivesTo report the laboratory investigation of a case of severe combined immunodeficiency (SCID) with maternal T-cell engraftment, focusing on the interference of human leukocyte antigen (HLA) typing by blood chimerism.

methodsHLA typing was performed with three different methods, including sequence-specific primer (SSP), sequence-specific oligonucleotide, and Sanger sequencing on peripheral blood leukocytes and buccal cells, from a 3-month-old boy and peripheral blood leukocytes from his parents. Short tandem repeat (STR) testing was performed in parallel.

resultsHLA typing of the patient's peripheral blood leukocytes using the SSP method demonstrated three different alleles for each of the HLA-B and HLA-C loci, with both maternal alleles present at each locus. Typing results from the patient's buccal cells showed a normal pattern of inheritance for paternal and maternal haplotypes. STR enrichment testing of the patient's CD3+ T lymphocytes and CD15+ myeloid cells confirmed maternal T-cell engraftment, while the myeloid cell profile matched the patient's buccal cells.

conclusionsMaternal T-cell engraftment may interfere with HLA typing in patients with SCID. Selection of the appropriate typing methods and specimens is critical for accurate HLA typing and immunologic assessment before allogeneic hematopoietic stem cell transplantation.

Indexed as

AllelesChimerismHaplotypesHematopoietic Stem Cell TransplantationHistocompatibility TestingHLA AntigensHLA-B AntigensHLA-C AntigensHumansImmunophenotypingInfantLeukocytesMaleMicrosatellite RepeatsMouth MucosaSequence Analysis, DNAHLA AntigensHLA-B AntigensHLA-C AntigensHLA typingMaternal T-cell engraftmentSanger sequencingSequence-specific oligonucleotideSequence-specific primerSevere combined immunodeficiencyShort tandem repeat

Identifiers

PMID26834123
PMCPMC4901308

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.