ArticleMolecular genetics and genomics : MGG2016
Genome-wide analysis of CrRLK1L gene family in Gossypium and identification of candidate CrRLK1L genes related to fiber development.
Article in Molecular genetics and genomics : MGG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 38 citations in OpenAlex.
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- Genome-wide analysis of the CrRLK1L gene family inFrontiers in plant science · 2025Article
- Co-Expression Network Analysis and Introgressive Gene Identification for Fiber Length and Strength Reveal Transcriptional Differences in 15 Cotton Chromosome Substitution Segment Lines and Their Upland and Sea Island Parents.Plants (Basel, Switzerland) · 2024Article
- Genome wide characterization and expression analysis ofFrontiers in plant science · 2024Article
- Emerging Roles of Receptor-like Protein Kinases in Plant Response to Abiotic Stresses.International journal of molecular sciences · 2023Review
- Genome-Wide Identification and Analysis ofPlants (Basel, Switzerland) · 2023Article
- Characterization of Malectin/Malectin-like Receptor-like Kinase Family Members in Foxtail Millet (Life (Basel, Switzerland) · 2023Article
- Genome-Wide Re-Identification and Analysis of CrRLK1Ls in Tomato.International journal of molecular sciences · 2023Article
- Systematic Analysis of Tobacco CrRLK1L Family Genes and Functional Identification ofFrontiers in plant science · 2022Article
- Genome-wide identification and analysis of Catharanthus roseus RLK1-like kinases in Nicotiana benthamiana.BMC plant biology · 2021Article
- Genome-Wide Analysis of theFrontiers in plant science · 2021Article
- Article
- Genome-wide classification, evolutionary analysis and gene expression patterns of the kinome in Gossypium.PloS one · 2018Article
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- Genome scanning for identification and mapping of receptor-like kinase (RLK) gene superfamily inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2017Article
- Genome-wide identification, classification, evolutionary analysis and gene expression patterns of the protein kinase gene family in wheat and Aegilops tauschii.Plant molecular biology · 2017Article
- Fine-mapping qFS07.1 controlling fiber strength in upland cotton (Gossypium hirsutum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Comparative genomic analysis of the PKS genes in five species and expression analysis in upland cotton.PeerJ · 2017Article
Corrections and comments
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Members of the CrRLK1L family, a subgroup of the receptor-like kinase (RLK) gene family, are thought to act as sensors for the integrity of the cell wall and regulators of polar elongation. To better understand the various functions in fiber development, we conducted genome-wide identification and characterization analyses of CrRLK1L family in cotton. Here 44, 40, and 79 CrRLK1L genes were identified from three cotton species: diploid G. raimondii (D5), diploid G. arboreum (A2), and tetraploid G. hirsutum TM-1 (AD1), respectively. The 44 CrRLK1Ls in G. raimondii were anchored to the 12 chromosomes unevenly and were classified into six groups (I-VI), with group II and group IV being further divided into two subgroups (groups IIa and IIb, and IVa and IVb, respectively). These CrRLK1Ls displayed a highly regular pattern of developmental and spatial regulation in cotton. Using the transcriptome data of five chromosomal segment introgression lines (CSILs) and the physical integration of CrRLK1Ls with the quantitative trait loci (QTLs) related to fiber quality traits, we revealed that six CrRLK1L genes were highly associated with fiber development. This study brings new insights into the integrated genome-wide identification of CrRLK1Ls in cotton and provides references for the genetic improvement of cotton fiber.
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