Evidence map›Paper›PMID 26833149›Full record

ArticleAntimicrobial agents and chemotherapy2016

Whole-Genome Sequence of a blaOXA-48-Harboring Raoultella ornithinolytica Clinical Isolate from Lebanon.

Charbel Al-Bayssari, Abiola Olumuyiwa Olaitan, Thongpan Leangapichart, Liliane Okdah, Fouad Dabboussi, Monzer Hamze, Jean-Marc Rolain

Abstract readCase Reports
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Emergence of Mobilized Tigecycline Resistance Gene ClusterTransboundary and emerging diseases · 2025
    Article
  2. Article
  3. Infection and drug resistance · 2020
    Review
  4. Comprehensive Genome Analysis of Carbapenem-ResistantAntimicrobial agents and chemotherapy · 2019
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. The rapid spread of carbapenem-resistant Enterobacteriaceae.Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Charbel Al-BayssariLaboratoire Microbiologie Santé et Environnement, Centre AZM pour la Recherche en Biotechnologie et ses Applications, Ecole Doctorale de Sciences et de Technologie, Université Libanaise, Tripoli, Lebanon Aix-Marseille Université, URMITE UM 63, CNRS 7278, IRD 198, INSERM U1905, Facultés de Médecine et de Pharmacie, Marseille, France.
Abiola Olumuyiwa OlaitanAix-Marseille Université, URMITE UM 63, CNRS 7278, IRD 198, INSERM U1905, Facultés de Médecine et de Pharmacie, Marseille, France.ORCID http://orcid.org/0000-0003-2005-5706
Thongpan LeangapichartAix-Marseille Université, URMITE UM 63, CNRS 7278, IRD 198, INSERM U1905, Facultés de Médecine et de Pharmacie, Marseille, France.
Liliane OkdahAix-Marseille Université, URMITE UM 63, CNRS 7278, IRD 198, INSERM U1905, Facultés de Médecine et de Pharmacie, Marseille, France.
Fouad DabboussiLaboratoire Microbiologie Santé et Environnement, Centre AZM pour la Recherche en Biotechnologie et ses Applications, Ecole Doctorale de Sciences et de Technologie, Université Libanaise, Tripoli, Lebanon.
Monzer HamzeLaboratoire Microbiologie Santé et Environnement, Centre AZM pour la Recherche en Biotechnologie et ses Applications, Ecole Doctorale de Sciences et de Technologie, Université Libanaise, Tripoli, Lebanon.
Jean-Marc RolainAix-Marseille Université, URMITE UM 63, CNRS 7278, IRD 198, INSERM U1905, Facultés de Médecine et de Pharmacie, Marseille, France Jean-marc.rolain@univ-amu.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We analyzed the whole-genome sequence of ablaOXA-48-harboringRaoultella ornithinolyticaclinical isolate from a patient in Lebanon. The size of theRaoultella ornithinolyticaCMUL058 genome was 5,622,862 bp, with a G+C content of 55.7%. We deciphered all the molecular mechanisms of antibiotic resistance, and we compared our genome to other availableR. ornithinolyticagenomes in GenBank. The resistome consisted of 9 antibiotic resistance genes, including a plasmidicblaOXA-48gene whose genetic organization is also described.

Indexed as

Genome, BacterialAgedAnti-Bacterial AgentsBase Compositionbeta-LactamasesDrug Resistance, Multiple, BacterialEnterobacteriaceaeEnterobacteriaceae InfectionsGene ExpressionGenome SizeHodgkin DiseaseHumansLebanonMalePlasmidsSequence Analysis, DNAAnti-Bacterial Agentsbeta-Lactamases

Identifiers

PMID26833149
PMCPMC4808190

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.