Evidence map›Paper›PMID 26831468›Full record

ArticleInfection and immunity2016

Characterization of SlyA in Shigella flexneri Identifies a Novel Role in Virulence.

Natasha Weatherspoon-Griffin, Helen J Wing

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A Tale aboutMicroorganisms · 2023
    Review
  6. VirB, a key transcriptional regulator ofbioRxiv : the preprint server for biology · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Frontiers in microbiology · 2018
    Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Natasha Weatherspoon-GriffinSchool of Life Sciences, University of Nevada Las Vegas, Las Vegas, Nevada, USA.
Helen J WingSchool of Life Sciences, University of Nevada Las Vegas, Las Vegas, Nevada, USA helen.wing@unlv.edu.
The University of Texas at Austin · USUniversity of Nevada, Las Vegas · US

Funding

Understanding transcriptional silencing & anti-silencing mechanisms in ShigellaR15AI090573 · NIAID · UNIVERSITY OF NEVADA LAS VEGAS · PI WING, HELEN J · 2010 to 2024
$2.3M
NIAID NIH HHS R15 AI090573NIAID NIH HHS R15 AI090573-02
6 · The paper itself

Abstract

The SlyA transcriptional regulator has important roles in the virulence and pathogenesis of several members of the Enterobacteriaceae family, including Salmonella enterica serovar Typhimurium and Escherichia coli. Despite the identification of the slyA gene in Shigella flexneri nearly 2 decades ago, as well as the significant conservation of SlyA among enteric bacteria, the role of SlyA in Shigella remains unknown. The genes regulated by SlyA in closely related organisms often are absent from or mutated inS. flexneri, and consequently many described SlyA-dependent phenotypes are not present. By characterizing the expression of slyA and determining its ultimate effect in this highly virulent organism, we postulated that novel SlyA-regulated virulence phenotypes would be identified. In this study, we report the first analysis of SlyA in Shigella and show that (i) the slyA gene is transcribed and ultimately translated into protein, (ii) slyA promoter activity is maximal during stationary phase and is negatively autoregulated and positively regulated by the PhoP response regulator, (iii) the exogenous expression of slyA rescues transcription and virulence-associated deficiencies during virulence-repressed conditions, and (iv) the absence of slyA significantly decreases acid resistance, demonstrating a novel and important role in Shigella virulence. Cumulatively, our study illustrates unexpected parallels between the less conserved S. flexneri and S Typhimurium slyA promoters as well as a unique role for SlyA in Shigella virulence that has not been described previously in any closely related organism.

Indexed as

Bacterial ProteinsBase SequenceDNA-Binding ProteinsGene Expression Regulation, BacterialHomeostasisPromoter Regions, GeneticShigella flexneriTranscription FactorsTranscriptomeUp-RegulationVirulenceBacterial ProteinsDNA-Binding ProteinsH-NS protein, bacteriasalmolysinTranscription Factors

Identifiers

PMID26831468
PMCPMC4807491
OpenAlexW2253878159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.