Evidence map›Paper›PMID 26831464›Full record

ArticleScientific reports2016

Gene profiling of embryonic skeletal muscle lacking type I ryanodine receptor Ca(2+) release channel.

Dilyana Filipova, Anna M Walter, John A Gaspar, Anna Brunn, Nina F Linde, Mostafa A Ardestani, Martina Deckert, Jürgen Hescheler, Gabriele Pfitzer, Agapios Sachinidis and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Ryanodine receptor RyR1-mediated elevation of CaJournal of animal science and biotechnology · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Ryanodine Receptor 1-Related Myopathies: Diagnostic and Therapeutic Approaches.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2018
    Review
  10. Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Dilyana FilipovaCenter of Physiology and Pathophysiology, Institute of Vegetative Physiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Anna M WalterCenter of Physiology and Pathophysiology, Institute of Vegetative Physiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
John A GasparCenter of Physiology and Pathophysiology, Institute of Neurophysiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Anna BrunnDepartment of Neuropathology, University Hospital of Cologne, Cologne, Germany.
Nina F LindeCenter of Physiology and Pathophysiology, Institute of Vegetative Physiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Mostafa A ArdestaniCenter of Physiology and Pathophysiology, Institute of Vegetative Physiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Martina DeckertDepartment of Neuropathology, University Hospital of Cologne, Cologne, Germany.
Jürgen HeschelerCenter of Physiology and Pathophysiology, Institute of Neurophysiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Gabriele PfitzerCenter of Physiology and Pathophysiology, Institute of Vegetative Physiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Agapios SachinidisCenter of Physiology and Pathophysiology, Institute of Neurophysiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
Symeon PapadopoulosCenter of Physiology and Pathophysiology, Institute of Vegetative Physiology, Medical Faculty of the University of Cologne, Robert-Koch-Str. 39, Cologne 50931, Germany.
University of Cologne · DEUniversity Hospital Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mature skeletal muscle, the intracellular Ca(2+) concentration rises dramatically upon membrane depolarization, constituting the link between excitation and contraction. This process requires Ca(2+) release from the sarcoplasmic reticulum via the type 1 ryanodine receptor (RYR1). However, RYR1's potential roles in muscle development remain obscure. We used an established RyR1- null mouse model, dyspedic, to investigate the effects of the absence of a functional RYR1 and, consequently, the lack of RyR1-mediated Ca(2+) signaling, during embryogenesis. Homozygous dyspedic mice die after birth and display small limbs and abnormal skeletal muscle organization. Skeletal muscles from front and hind limbs of dyspedic fetuses (day E18.5) were subjected to microarray analyses, revealing 318 differentially expressed genes. We observed altered expression of multiple transcription factors and members of key signaling pathways. Differential regulation was also observed for genes encoding contractile as well as muscle-specific structural proteins. Additional qRT-PCR analysis revealed altered mRNA levels of the canonical muscle regulatory factors Six1, Six4, Pax7, MyoD, MyoG and MRF4 in mutant muscle, which is in line with the severe developmental retardation seen in dyspedic muscle histology analyses. Taken together, these findings suggest an important non-contractile role of RyR1 or RYR1-mediated Ca(2+) signaling during muscle organ development.

Indexed as

Calcium SignalingGene Expression Regulation, DevelopmentalMuscle DevelopmentAnimalsEmbryo, MammalianGene Expression ProfilingMiceMice, KnockoutMuscle ProteinsMuscle, SkeletalOligonucleotide Array Sequence AnalysisRyanodine Receptor Calcium Release ChannelMuscle Proteinsryanodine receptor 1, mouseRyanodine Receptor Calcium Release Channel

Identifiers

PMID26831464
PMCPMC4735524
OpenAlexW2408821446

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.