Evidence map›Paper›PMID 26831104›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

TLR4/MD-2 activation by a synthetic agonist with no similarity to LPS.

Ying Wang, Lijing Su, Matthew D Morin, Brian T Jones, Landon R Whitby, Murali M R P Surakattula, Hua Huang, Hexin Shi, Jin Huk Choi, Kuan-wen Wang and 6 more

Erratum issuedAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed.

  1. Trial
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  13. A myeloid differentiation-like protein in partnership with Toll5 from the pest insectProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  16. Salvimulticanol from3 Biotech · 2024
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  17. In Vitro Anti-Inflammatory Study of Limonoids Isolated fromCurrent issues in molecular biology · 2024
    Article
  18. Article
  19. Article
  20. Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Ying WangCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Lijing SuDepartment of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Matthew D MorinDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037;
Brian T JonesDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037;
Landon R WhitbyDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037;
Murali M R P SurakattulaDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037;
Hua HuangDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037.
Hexin ShiCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Jin Huk ChoiCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Kuan-wen WangCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Eva Marie Y MorescoCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Michael BergerDepartment of Genetics, The Scripps Research Institute, La Jolla, CA 92037.
Xiaoming ZhanCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390;
Hong ZhangDepartment of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390; Bruce.Beutler@UTSouthwestern.edu boger@scripps.edu zhang@chop.swmed.edu.
Dale L BogerDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037; Bruce.Beutler@UTSouthwestern.edu boger@scripps.edu zhang@chop.swmed.edu.
Bruce BeutlerCenter for the Genetics of Host Defense, University of Texas Southwestern Medical Center, Dallas, TX 75390; Bruce.Beutler@UTSouthwestern.edu boger@scripps.edu zhang@chop.swmed.edu.

Funding

Systems Biology CoreU19AI100627 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2012 to 2021
$49.1M
Discovery and Analysis of Synthetic TLR Agonists and AntagonistsU24AI082657 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BEUTLER, BRUCE A, BOGER, DALE L · 2009 to 2013
$3.8M
Molecular interactions of mammalian circadian clock proteinsR01GM104496 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI TAKAHASHI, JOSEPH S, ZHANG, HONG · 2013 to 2016
$1.2M
NIAID NIH HHS U19 AI100627NIAID NIH HHS U24 AI082657NIGMS NIH HHS R01 GM104496NIGMS NIH HHS R01GM104496
6 · The paper itself

Abstract

Structurally disparate molecules reportedly engage and activate Toll-like receptor (TLR) 4 and other TLRs, yet the interactions that mediate binding and activation by dissimilar ligands remain unknown. We describe Neoseptins, chemically synthesized peptidomimetics that bear no structural similarity to the established TLR4 ligand, lipopolysaccharide (LPS), but productively engage the mouse TLR4 (mTLR4)/myeloid differentiation factor 2 (MD-2) complex. Neoseptin-3 activates mTLR4/MD-2 independently of CD14 and triggers canonical myeloid differentiation primary response gene 88 (MyD88)- and Toll-interleukin 1 receptor (TIR) domain-containing adaptor inducing IFN-beta (TRIF)-dependent signaling. The crystal structure mTLR4/MD-2/Neoseptin-3 at 2.57-Å resolution reveals that Neoseptin-3 binds as an asymmetrical dimer within the hydrophobic pocket of MD-2, inducing an active receptor complex similar to that induced by lipid A. However, Neoseptin-3 and lipid A form dissimilar molecular contacts to achieve receptor activation; hence strong TLR4/MD-2 agonists need not mimic LPS.

Indexed as

AnimalsLipopolysaccharidesLymphocyte Antigen 96MiceMice, Inbred C57BLMice, TransgenicMitogen-Activated Protein KinasesNF-kappa BPeptidomimeticsProtein Serine-Threonine KinasesSignal TransductionToll-Like Receptor 4LipopolysaccharidesLy96 protein, mouseLymphocyte Antigen 96Mitogen-Activated Protein KinasesNF-kappa BPeptidomimeticsProtein Serine-Threonine KinasesTbk1 protein, mouseToll-Like Receptor 4crystal structureinnate immunityneoseptinspeptidomimetic compoundsproinflammatory response

Identifiers

PMID26831104
PMCPMC4763747

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.