Evidence map›Paper›PMID 26831082›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Quantitative nanoscale imaging of orientational order in biological filaments by polarized superresolution microscopy.

Cesar Augusto Valades Cruz, Haitham Ahmed Shaban, Alla Kress, Nicolas Bertaux, Serge Monneret, Manos Mavrakis, Julien Savatier, Sophie Brasselet

Open access · bronzeAbstract readValidation Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
20.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 149 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Cesar Augusto Valades CruzAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Haitham Ahmed ShabanAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Alla KressAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Nicolas BertauxAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Serge MonneretAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Manos MavrakisAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Julien SavatierAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France.
Sophie BrasseletAix-Marseille Université, CNRS, Centrale Marseille, Institut Fresnel, UMR 7249, 13397 Marseille, France sophie.brasselet@fresnel.fr.
Mosaic Company (United States)Centre National de la Recherche Scientifique · FRInstitut Fresnel · FRCentrale Marseille · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Essential cellular functions as diverse as genome maintenance and tissue morphogenesis rely on the dynamic organization of filamentous assemblies. For example, the precise structural organization of DNA filaments has profound consequences on all DNA-mediated processes including gene expression, whereas control over the precise spatial arrangement of cytoskeletal protein filaments is key for mechanical force generation driving animal tissue morphogenesis. Polarized fluorescence is currently used to extract structural organization of fluorescently labeled biological filaments by determining the orientation of fluorescent labels, however with a strong drawback: polarized fluorescence imaging is indeed spatially limited by optical diffraction, and is thus unable to discriminate between the intrinsic orientational mobility of the fluorophore labels and the real structural disorder of the labeled biomolecules. Here, we demonstrate that quantitative single-molecule polarized detection in biological filament assemblies allows not only to correct for the rotational flexibility of the label but also to image orientational order of filaments at the nanoscale using superresolution capabilities. The method is based on polarized direct stochastic optical reconstruction microscopy, using dedicated optical scheme and image analysis to determine both molecular localization and orientation with high precision. We apply this method to double-stranded DNA in vitro and microtubules and actin stress fibers in whole cells.

Indexed as

AnimalsDNAFluorescence PolarizationMicroscopy, FluorescenceModels, TheoreticalNanotechnologyDNAactin orderdsDNA orderpolarizationsingle-molecule orientationsuperresolution

Identifiers

PMID26831082
PMCPMC4763786
OpenAlexW2254729186

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.