Evidence map›Paper›PMID 26831073›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Huntingtin exon 1 fibrils feature an interdigitated β-hairpin-based polyglutamine core.

Cody L Hoop, Hsiang-Kai Lin, Karunakar Kar, Gábor Magyarfalvi, Jonathan M Lamley, Jennifer C Boatz, Abhishek Mandal, Józef R Lewandowski, Ronald Wetzel, Patrick C A van der Wel

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 184 citations in OpenAlex.

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  19. Contribution of protein conformational heterogeneity to NMR lineshapes at cryogenic temperatures.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Cody L HoopDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260;
Hsiang-Kai LinDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260;
Karunakar KarDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260; Pittsburgh Institute for Neurodegenerative Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260;
Gábor MagyarfalviLaboratory of Molecular Spectroscopy, Institute of Chemistry, Eötvös University, H-1518, Budapest 112, Hungary;
Jonathan M LamleyDepartment of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom.
Jennifer C BoatzDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260;
Abhishek MandalDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260;
Józef R LewandowskiDepartment of Chemistry, University of Warwick, Coventry CV4 7AL, United Kingdom.
Ronald WetzelDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260; Pittsburgh Institute for Neurodegenerative Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260;
Patrick C A van der WelDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260; vanderwel@pitt.edu.ORCID http://orcid.org/0000-0002-5390-3321
University of Pittsburgh · USUniversity of Warwick · GBEötvös Loránd University · HUIndian Institute of Technology Jodhpur · IN

Funding

UNIVERSITY OF PITTSBURGH CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTE: BPCAUL1RR024153 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2006 to 2011
$73.9M
Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Structures and Properties of Polyglutamine Proteins and Their AggregatesR01AG019322 · NIA · UNIVERSITY OF TENNESSEE KNOXVILLE · PI WETZEL, RONALD B · 2001 to 2014
$4.6M
Training in the Molecular Biophysics and Structural BiologyT32GM088119 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HINCK, ANDREW P · 2011 to 2020
$1.6M
Structural polymorphism in the misfolding and aggregation of expanded polyglutamine proteinsR01GM112678 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CONWAY, JAMES F. · 2015 to 2019
$1.4M
Mechanisms of amyloid nucleationR01GM099718 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WETZEL, RONALD B · 2012 to 2015
$1.1M
Biotechnology and Biological Sciences Research Council BB/L022761/1NCRR NIH HHS UL1 RR024153NIA NIH HHS AG019322NIA NIH HHS R01 AG019322NIGMS NIH HHS P41 GM103311NIGMS NIH HHS P41-GM103311NIGMS NIH HHS R01 GM099718NIGMS NIH HHS R01 GM112678NIGMS NIH HHS T32 GM088119
6 · The paper itself

Abstract

Polyglutamine expansion within the exon1 of huntingtin leads to protein misfolding, aggregation, and cytotoxicity in Huntington's disease. This incurable neurodegenerative disease is the most prevalent member of a family of CAG repeat expansion disorders. Although mature exon1 fibrils are viable candidates for the toxic species, their molecular structure and how they form have remained poorly understood. Using advanced magic angle spinning solid-state NMR, we directly probe the structure of the rigid core that is at the heart of huntingtin exon1 fibrils and other polyglutamine aggregates, via measurements of long-range intramolecular and intermolecular contacts, backbone and side-chain torsion angles, relaxation measurements, and calculations of chemical shifts. These experiments reveal the presence of β-hairpin-containing β-sheets that are connected through interdigitating extended side chains. Despite dramatic differences in aggregation behavior, huntingtin exon1 fibrils and other polyglutamine-based aggregates contain identical β-strand-based cores. Prior structural models, derived from X-ray fiber diffraction and computational analyses, are shown to be inconsistent with the solid-state NMR results. Internally, the polyglutamine amyloid fibrils are coassembled from differently structured monomers, which we describe as a type of "intrinsic" polymorphism. A stochastic polyglutamine-specific aggregation mechanism is introduced to explain this phenomenon. We show that the aggregation of mutant huntingtin exon1 proceeds via an intramolecular collapse of the expanded polyglutamine domain and discuss the implications of this observation for our understanding of its misfolding and aggregation mechanisms.

Indexed as

Amino Acid SequenceAmyloidExonsMagnetic Resonance SpectroscopyModels, MolecularMolecular Sequence DataNerve Tissue ProteinsPeptidesProtein Structure, SecondaryStochastic ProcessesAmyloidNerve Tissue ProteinsPeptidespolyglutamineamyloidamyloid diseaseHuntington's diseaseprotein aggregationsolid-state NMR

Identifiers

PMID26831073
PMCPMC4760812
OpenAlexW2253321251

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.