Evidence map›Paper›PMID 26828964›Full record

ArticleNature structural & molecular biology2016

Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters.

Mathieu Coincon, Povilas Uzdavinys, Emmanuel Nji, David L Dotson, Iven Winkelmann, Saba Abdul-Hussein, Alexander D Cameron, Oliver Beckstein, David Drew

Abstract read
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In one paragraph

Article in Nature structural & molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Structure and Inhibition of the Human NaInternational journal of molecular sciences · 2025
    Article
  6. PIPNature communications · 2025
    Article
  7. Article
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  10. Structure and mechanism of the KNature communications · 2024
    Article
  11. Review
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  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Crystal structure of the NaNature communications · 2022
    Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Mathieu CoinconDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Povilas UzdavinysDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Emmanuel NjiDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-6991-1046
David L DotsonDepartment of Physics, Arizona State University, Tempe, Arizona, USA.ORCID http://orcid.org/0000-0001-5879-2942
Iven WinkelmannDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Saba Abdul-HusseinDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
Alexander D CameronSchool of Life Sciences, University of Warwick, Coventry, UK.
Oliver BecksteinDepartment of Physics, Arizona State University, Tempe, Arizona, USA.
David DrewDepartment of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To fully understand the transport mechanism of Na(+)/H(+) exchangers, it is necessary to clearly establish the global rearrangements required to facilitate ion translocation. Currently, two different transport models have been proposed. Some reports have suggested that structural isomerization is achieved through large elevator-like rearrangements similar to those seen in the structurally unrelated sodium-coupled glutamate-transporter homolog GltPh. Others have proposed that only small domain movements are required for ion exchange, and a conventional rocking-bundle model has been proposed instead. Here, to resolve these differences, we report atomic-resolution structures of the same Na(+)/H(+) antiporter (NapA from Thermus thermophilus) in both outward- and inward-facing conformations. These data combined with cross-linking, molecular dynamics simulations and isothermal calorimetry suggest that Na(+)/H(+) antiporters provide alternating access to the ion-binding site by using elevator-like structural transitions.

Indexed as

CalorimetryCrystallography, X-RayModels, MolecularMolecular Dynamics SimulationProtein ConformationSodium-Hydrogen ExchangersThermus thermophilusSodium-Hydrogen Exchangers

Identifiers

PMID26828964

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.