Evidence map›Paper›PMID 26828796›Full record

ArticlePloS one2016

Oxidation of Phe454 in the Gating Segment Inactivates Trametes multicolor Pyranose Oxidase during Substrate Turnover.

Petr Halada, Dagmar Brugger, Jindrich Volc, Clemens K Peterbauer, Christian Leitner, Dietmar Haltrich

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Petr HaladaInstitute of Microbiology of the ASCR, v.v.i., Vídeňská 1083, Prague, Czech Republic.
Dagmar BruggerFood Biotechnology Laboratory, BOKU-University of Natural Resources and Life Sciences Vienna, Vienna, Austria.
Jindrich VolcInstitute of Microbiology of the ASCR, v.v.i., Vídeňská 1083, Prague, Czech Republic.
Clemens K PeterbauerFood Biotechnology Laboratory, BOKU-University of Natural Resources and Life Sciences Vienna, Vienna, Austria.
Christian LeitnerFood Biotechnology Laboratory, BOKU-University of Natural Resources and Life Sciences Vienna, Vienna, Austria.
Dietmar HaltrichFood Biotechnology Laboratory, BOKU-University of Natural Resources and Life Sciences Vienna, Vienna, Austria.
BOKU University · ATCzech Academy of Sciences, Institute of Microbiology · CZ

Funding

Austrian Science Fund FWF W 1224
6 · The paper itself

Abstract

The flavin-dependent enzyme pyranose oxidase catalyses the oxidation of several pyranose sugars at position C-2. In a second reaction step, oxygen is reduced to hydrogen peroxide. POx is of interest for biocatalytic carbohydrate oxidations, yet it was found that the enzyme is rapidly inactivated under turnover conditions. We studied pyranose oxidase from Trametes multicolor (TmPOx) inactivated either during glucose oxidation or by exogenous hydrogen peroxide using mass spectrometry. MALDI-MS experiments of proteolytic fragments of inactivated TmPOx showed several peptides with a mass increase of 16 or 32 Da indicating oxidation of certain amino acids. Most of these fragments contain at least one methionine residue, which most likely is oxidised by hydrogen peroxide. One peptide fragment that did not contain any amino acid residue that is likely to be oxidised by hydrogen peroxide (DAFSYGAVQQSIDSR) was studied in detail by LC-ESI-MS/MS, which showed a +16 Da mass increase for Phe454. We propose that oxidation of Phe454, which is located at the flexible active-site loop of TmPOx, is the first and main step in the inactivation of TmPOx by hydrogen peroxide. Oxidation of methionine residues might then further contribute to the complete inactivation of the enzyme.

Indexed as

Amino Acid SequenceCarbohydrate DehydrogenasesCatalytic DomainEnzyme ActivationEnzyme StabilityHydrogen PeroxideKineticsMass SpectrometryMethionineModels, MolecularMolecular ConformationMolecular Sequence DataOxidation-ReductionPeptidesPhenylalanineSubstrate SpecificityCarbohydrate DehydrogenasesHydrogen PeroxideMethioninePeptidesPhenylalaninepyranose oxidase

Identifiers

PMID26828796
PMCPMC4735113
OpenAlexW2260557230

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.