Evidence map›Paper›PMID 26828474›Full record

ArticleMolecules (Basel, Switzerland)2016

Binding between Saikosaponin C and Human Serum Albumin by Fluorescence Spectroscopy and Molecular Docking.

Yi-Cun Chen, Hong-Mei Wang, Qing-Xia Niu, Dan-Yan Ye, Guo-Wu Liang

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 58 citations in OpenAlex.

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  15. A glucose/mannose binding lectin from litchi (Biochemistry and biophysics reports · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yi-Cun ChenKey Immunopharmacology Laboratory of Guangdong Province, Department of Pathophysiology, Institute of Inflammation and Immune Diseases, Shantou University Medical College, Guangdong 515041, China. chenyicun@yeah.net.
Hong-Mei WangKey Immunopharmacology Laboratory of Guangdong Province, Department of Pathophysiology, Institute of Inflammation and Immune Diseases, Shantou University Medical College, Guangdong 515041, China. junebulu@163.com.
Qing-Xia NiuKey Immunopharmacology Laboratory of Guangdong Province, Department of Pathophysiology, Institute of Inflammation and Immune Diseases, Shantou University Medical College, Guangdong 515041, China. nqx_1961@163.com.
Dan-Yan YeDepartment of Pharmacology, Traditional Chinese Medicine Laboratory, Shantou University Medical College, Guangdong 515041, China. 15917907394@163.com.
Guo-Wu LiangKey Immunopharmacology Laboratory of Guangdong Province, Department of Pathophysiology, Institute of Inflammation and Immune Diseases, Shantou University Medical College, Guangdong 515041, China. gwliangizzy@163.com.
Shantou University · CNShantou University Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saikosaponin C (SSC) is one of the major active constituents of dried Radix bupleuri root (Chaihu in Chinese) that has been widely used in China to treat a variety of conditions, such as liver disease, for many centuries. The binding of SSC to human serum albumin (HSA) was explored by fluorescence, circular dichroism (CD), UV-vis spectrophotometry, and molecular docking to understand both the pharmacology and the basis of the clinical use of SSC/Chaihu. SSC produced a concentration-dependent quenching effect on the intrinsic fluorescence of HSA, accompanied by a blue shift in the fluorescence spectra. The Stern-Volmer equation showed that this quenching was dominated by static quenching. The binding constant of SSC with HSA was 3.72 × 10³ and 2.99 × 10³ L·mol(-1) at 26 °C and 36 °C, respectively, with a single binding site on each SSC and HSA molecule. Site competitive experiments demonstrated that SSC bound to site I (subdomain IIA) and site II (subdomain IIIA) in HSA. Analysis of thermodynamic parameters indicated that hydrogen bonding and van der Waals forces were mostly responsible for SSC-HSA association. The energy transfer efficiency and binding distance between SSC and HSA was calculated to be 0.23 J and 2.61 nm at 26 °C, respectively. Synchronous fluorescence and CD measurements indicated that SSC affected HSA conformation in the SSC-HSA complex. Molecular docking supported the experimental findings in conformational changes, binding sites and binding forces, and revealed binding of SSC at the interface between subdomains IIA-IIB.

Indexed as

Binding SitesCircular DichroismEnergy TransferHumansHydrogen BondingModels, MolecularMolecular Docking SimulationOleanolic AcidProtein BindingProtein ConformationSaponinsSerum AlbuminSpectrometry, FluorescenceOleanolic Acidsaikosaponin DSaponinsSerum AlbuminChaihuhuman serum albuminmolecular dockingRadix bupleurisaikosaponin Cstatic quenching

Identifiers

PMID26828474
PMCPMC6273137
OpenAlexW2284098390

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.