Evidence map›Paper›PMID 26827935›Full record

ReviewMethods (San Diego, Calif.)2016

Fixed and live visualization of RNAs in Drosophila oocytes and embryos.

Evan K Abbaszadeh, Elizabeth R Gavis

Abstract readReview
In one paragraph

Review in Methods (San Diego, Calif.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
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  11. Article
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  15. Review
  16. CompartmentalizedeLife · 2020
    Article
  17. Article
  18. Article
  19. A Gene Expression Screen inG3 (Bethesda, Md.) · 2019
    Article
  20. Frontiers in genetics · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Evan K AbbaszadehDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, United States.
Elizabeth R GavisDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, United States. Electronic address: gavis@princeton.edu.

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Mechanism of RNA Localization in Drosophila DevelopmentR01GM067758 · NIGMS · PRINCETON UNIVERSITY · PI GAVIS, ELIZABETH R · 2004 to 2017
$5.3M
NIGMS NIH HHS R01 GM067758NIGMS NIH HHS R01GM067758NIGMS NIH HHS T32 GM007388
6 · The paper itself

Abstract

The ability to visualize RNA in situ is essential to dissect mechanisms for the temporal and spatial regulation of gene expression that drives development. Although considerable attention has been focused on transcriptional control, studies in model organisms like Drosophila have highlighted the importance of post-transcriptional mechanisms - most notably intracellular mRNA localization - in the formation and patterning of the body axes, specification of cell fates, and polarized cell functions. Our understanding of both types of regulation has been greatly advanced by technological innovations that enable a combination of highly quantitative and dynamic analysis of RNA. This review presents two methods, single molecule fluorescence in situ hybridization for high resolution quantitative RNA detection in fixed Drosophila oocytes and embryos and genetically encoded fluorescent RNA labeling for detection in live cells.

Indexed as

AnimalsBody PatterningDrosophila melanogasterEmbryo, NonmammalianFemaleFixativesGene Expression Regulation, DevelopmentalIn Situ Hybridization, FluorescenceOocytesRecombinant Fusion ProteinsRNA, MessengerSingle Molecule ImagingStaining and LabelingTissue FixationFixativesRecombinant Fusion ProteinsRNA, MessengerIntracellular mRNA localizationIn vivo RNA labelingmRNA expression patternsMS2/MCPPP7/PCPsmFISH

Identifiers

PMID26827935
PMCPMC4808400

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.