Evidence map›Paper›PMID 26826249›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2016

Molecular Basis of the Functional Differences between Soluble Human Versus Murine MD-2: Role of Val135 in Transfer of Lipopolysaccharide from CD14 to MD-2.

Jožica Vašl, Alja Oblak, Tina T Peternelj, Javier Klett, Sonsoles Martín-Santamaría, Theresa L Gioannini, Jerrold P Weiss, Roman Jerala

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Jožica VašlDepartment of Biotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia;
Alja OblakDepartment of Biotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia;
Tina T PeterneljDepartment of Biotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia;
Javier KlettCenter for Biological Research, Superior Council for Scientific Research, 28040 Madrid, Spain;ORCID http://orcid.org/0000-0001-8495-6568
Sonsoles Martín-SantamaríaCenter for Biological Research, Superior Council for Scientific Research, 28040 Madrid, Spain;ORCID http://orcid.org/0000-0002-7679-0155
Theresa L GioanniniInflammation Program, Department of Microbiology, Carver College of Medicine, University of Iowa, Iowa City, IA 52241; Veterans Affairs Medical Center, Iowa City, IA 52246; and.
Jerrold P WeissInflammation Program, Department of Microbiology, Carver College of Medicine, University of Iowa, Iowa City, IA 52241;ORCID http://orcid.org/0000-0003-1476-4485
Roman JeralaDepartment of Biotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia; Excellent Nuclear Magnetic Resonance-Future Innovation for Sustainable Technologies Center of Excellence, 1000 Ljubljana, Slovenia roman.jerala@ki.si.
National Institute of Biology · SICouncil for Scientific and Industrial Research · ZAUniversity of Iowa · USSustainable Innovation (Sweden) · SE

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Brandi Janssen · 1990 to 2026
$40.5M
Regulation of MD-2 function and expressionR01AI059372 · NIAID · UNIVERSITY OF IOWA · PI WEISS, JERROLD P · 2004 to 2013
$3.6M
NIAID NIH HHS AI05732NIAID NIH HHS R01 AI059372NIEHS NIH HHS P30 ES005605
6 · The paper itself

Abstract

Myeloid differentiation factor 2 (MD-2) is an extracellular protein, associated with the ectodomain of TLR4, that plays a critical role in the recognition of bacterial LPS. Despite high overall structural and functional similarity, human (h) and murine (m) MD-2 exhibit several species-related differences. hMD-2 is capable of binding LPS in the absence of TLR4, whereas mMD-2 supports LPS responsiveness only when mMD-2 and mTLR4 are coexpressed in the same cell. Previously, charged residues at the edge of the LPS binding pocket have been attributed to this difference. In this study, site-directed mutagenesis was used to explore the hydrophobic residues within the MD-2 binding pocket as the source of functional differences between hMD-2 and mMD-2. Whereas decreased hydrophobicity of residues 61 and 63 in the hMD-2 binding pocket retained the characteristics of wild-type hMD-2, a relatively minor change of valine to alanine at position 135 completely abolished the binding of LPS to the hMD-2 mutant. The mutant, however, retained the LPS binding in complex with TLR4 and also cell activation, resulting in a murine-like phenotype. These results were supported by the molecular dynamics simulation. We propose that the residue at position 135 of MD-2 governs the dynamics of the binding pocket and its ability to accommodate lipid A, which is allosterically affected by bound TLR4.

Indexed as

Amino Acid SequenceAnimalsBinding SitesBiological TransportCell LineGene ExpressionHumansHydrophobic and Hydrophilic InteractionsLipopolysaccharide ReceptorsLipopolysaccharidesLymphocyte Antigen 96MiceModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingLipopolysaccharide ReceptorsLipopolysaccharidesLymphocyte Antigen 96Toll-Like Receptor 4

Identifiers

PMID26826249
PMCPMC5348922
OpenAlexW2257561584

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.