Evidence map›Paper›PMID 26826127›Full record

ArticleThe Journal of biological chemistry2016

Valosin-containing Protein (VCP)/p97 Segregase Mediates Proteolytic Processing of Cockayne Syndrome Group B (CSB) in Damaged Chromatin.

Jinshan He, Qianzheng Zhu, Gulzar Wani, Nidhi Sharma, Altaf A Wani

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  9. Revisiting the Function of p21International journal of molecular sciences · 2022
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  14. The AAA+ ATPase p97, a cellular multitool.The Biochemical journal · 2017
    Review
  15. Article
  16. Review
  17. Review
  18. UBXD Proteins: A Family of Proteins with Diverse Functions in Cancer.International journal of molecular sciences · 2016
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jinshan HeFrom the Departments of Radiology and.
Qianzheng ZhuFrom the Departments of Radiology and zhu.49@osu.edu.
Gulzar WaniFrom the Departments of Radiology and.
Nidhi SharmaFrom the Departments of Radiology and.
Altaf A WaniFrom the Departments of Radiology and Molecular and Cellular Biochemistry and James Cancer Hospital and Solove Research Institute, Ohio State University, Columbus, Ohio 43210 wani.2@osu.edu.
The Ohio State University · USThe Ohio State University Comprehensive Cancer Center – Arthur G. James Cancer Hospital and Richard J. Solove Research Institute · US

Funding

Cross-talking pre-incision events of eukaryotic NERR01ES012991 · NIEHS · OHIO STATE UNIVERSITY · PI WANI, ALTAF A, ZHU, QIANZHENG · 2004 to 2020
$6.2M
DNA DAMAGE RESPONSES FOLLOWING GENOTOXIN EXPOSURER01ES002388 · NIEHS · OHIO STATE UNIVERSITY · PI WANI, ALTAF A · 1985 to 2016
$4.9M
NIEHS NIH HHS ES002388NIEHS NIH HHS ES012991NIEHS NIH HHS R01 ES002388NIEHS NIH HHS R01 ES012991
6 · The paper itself

Abstract

Cockayne syndrome group A and B (CSB) proteins act in transcription-coupled repair, a subpathway of nucleotide excision repair. Here we demonstrate that valosin-containing protein (VCP)/p97 segregase functions in ultraviolet radiation (UVR)-induced ubiquitin-mediated CSB degradation. We show that VCP/p97 inhibition and siRNA-mediated ablation of VCP/p97 and its cofactors UFD1 and UBXD7 impair CSB degradation. VCP/p97 inhibition also results in the accumulation of CSB in chromatin. Moreover, VCP/p97 interacts with both native and ubiquitin-conjugated forms of CSB. The localized cellular UVR exposures lead to VCP/p97 accumulation at DNA damage spots, forming distinct UVR-induced foci. However, manifestation of VCP/p97 foci is independent of CSB and UBXD7. Furthermore, VCP/p97 and UBXD7 associate with the Cockayne syndrome group A-DDB1-Cul4A complex, an E3 ligase responsible for CSB ubiquitination. Compromising proteasome and VCP/p97 function allows accumulation of both native and ubiquitinated CSB and results in an increase of UBXD7, proteasomal RPN2, and Sug1 in the chromatin compartment. Surprisingly, both biochemical inhibition and genetic defect of VCP/p97 enhance the recovery of RNA synthesis following UVR, whereas both VCP/p97 and proteasome inhibitions decrease cell viability. Our findings reveal a new role of VCP/p97 segregase in the timely processing of ubiquitinated CSB from damaged chromatin.

Indexed as

DNA DamageProteolysisAdaptor Proteins, Signal TransducingAdaptor Proteins, Vesicular TransportAdenosine TriphosphatasesATPases Associated with Diverse Cellular ActivitiesCarrier ProteinsCell Cycle ProteinsCell LineChromatinCullin ProteinsDNA-Binding ProteinsDNA HelicasesDNA Repair EnzymesHexosyltransferasesIntracellular Signaling Peptides and ProteinsAdaptor Proteins, Signal TransducingAdaptor Proteins, Vesicular TransportAdenosine TriphosphatasesATPases Associated with Diverse Cellular ActivitiesCarrier ProteinsCell Cycle ProteinsChromatinCUL4A protein, humanCullin ProteinsDDB1 protein, humanDNA-Binding ProteinsDNA HelicasesDNA Repair EnzymesERCC6 protein, humanERCC8 protein, humanHexosyltransferasesIntracellular Signaling Peptides and ProteinsLIM Domain ProteinsPoly-ADP-Ribose Binding ProteinsProteasome Endopeptidase ComplexProteinsPSMC5 protein, humanRPN2 protein, humanTranscription FactorsUBXN7 protein, humanUFD1 protein, humanValosin Containing ProteinVCP protein, humanCockayne syndrome group B proteinDNA damageDNA repairnucleotide excision repairprotein degradationtranscription-coupled repairubiquitinvalosin-containing protein

Identifiers

PMID26826127
PMCPMC4817171
OpenAlexW2328278438

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.