Evidence map›Paper›PMID 26824387›Full record

ArticleeLife2016

Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.

Curtis McMurtrey, Thomas Trolle, Tiffany Sansom, Soumya G Remesh, Thomas Kaever, Wilfried Bardet, Kenneth Jackson, Rima McLeod, Alessandro Sette, Morten Nielsen and 4 more

Abstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Study of dense granule proteins inFrontiers in immunology · 2025
    Article
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  10. Diverse cytomegalovirus US11 antagonism and MHC-A evasion strategies reveal a tit-for-tat coevolutionary arms race in hominids.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Proteomics Applications inPathogens (Basel, Switzerland) · 2023
    Review
  12. CD4Vaccines · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Curtis McMurtreyDepartment of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, United States.ORCID http://orcid.org/0000-0003-4540-4140
Thomas TrolleCenter for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.ORCID http://orcid.org/0000-0003-0762-2198
Tiffany SansomDepartment of Microbiology and Immunology, University at Buffalo School of Medicine, Buffalo, United States.
Soumya G RemeshLa Jolla Institute for Allergy and Immunology, La Jolla, United States.
Thomas KaeverLa Jolla Institute for Allergy and Immunology, La Jolla, United States.
Wilfried BardetDepartment of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, United States.
Kenneth JacksonDepartment of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, United States.
Rima McLeodUniversity of Chicago, Chicago, United States.
Alessandro SetteLa Jolla Institute for Allergy and Immunology, La Jolla, United States.
Morten NielsenCenter for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
Dirk M ZajoncLa Jolla Institute for Allergy and Immunology, La Jolla, United States.
Ira J BladerDepartment of Microbiology and Immunology, University at Buffalo School of Medicine, Buffalo, United States.
Bjoern PetersLa Jolla Institute for Allergy and Immunology, La Jolla, United States.
William HildebrandDepartment of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, United States.

Funding

Translation of immunologic technologies from basic research into pre-clinical nonU19AI062629 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI COGGESHALL, KENNETH MARK · 2004 to 2023
$56.2M
Towards a Vaccine to Prevent ToxoplasmosisU01AI077887 · NIAID · UNIVERSITY OF CHICAGO · PI MCLEOD, RIMA L · 2008 to 2012
$4.2M
NIAID NIH HHS HHSN272201200010CNIAID NIH HHS U01 AI077887NIAID NIH HHS U01 AI77887NIAID NIH HHS U19 AI062629NIAID NIH HHS U19 AI062629-05PHS HHS R01 27530
6 · The paper itself

Abstract

HLA class I presentation of pathogen-derived peptide ligands is essential for CD8+ T-cell recognition of Toxoplasma gondii infected cells. Currently, little data exist pertaining to peptides that are presented after T. gondii infection. Herein we purify HLA-A*02:01 complexes from T. gondii infected cells and characterize the peptide ligands using LCMS. We identify 195 T. gondii encoded ligands originating from both secreted and cytoplasmic proteins. Surprisingly, T. gondii ligands are significantly longer than uninfected host ligands, and these longer pathogen-derived peptides maintain a canonical N-terminal binding core yet exhibit a C-terminal extension of 1-30 amino acids. Structural analysis demonstrates that binding of extended peptides opens the HLA class I F' pocket, allowing the C-terminal extension to protrude through one end of the binding groove. In summary, we demonstrate that unrealized structural flexibility makes MHC class I receptive to parasite-derived ligands that exhibit unique C-terminal peptide extensions.

Indexed as

Antigens, ProtozoanCell LineHistocompatibility Antigens Class IHumansModels, MolecularMonocytesProtein BindingProtein ConformationProtozoan ProteinsToxoplasmaAntigens, ProtozoanHistocompatibility Antigens Class IProtozoan ProteinscrystallographyHLAhumanimmunologyinfectious diseasemass spectrometrymicrobiologypeptide ligandsT. gondii

Identifiers

PMID26824387
PMCPMC4775218

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.