Evidence map›Paper›PMID 26823822›Full record

ArticleInternational journal of clinical and experimental pathology2015

Single nucleotide polymorphism of NKX2-5 gene with sporadic congenital heart disease in Chinese Bai population.

Yu Cao, Weixing Lan, Yaxiong Li, Chuanyu Wei, Honglin Zou, Lihong Jiang

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. The role of NKX2-5 gene polymorphisms in congenital heart disease (CHD): a systematic review and meta-analysis.The Egyptian heart journal : (EHJ) : official bulletin of the Egyptian Society of Cardiology · 2021
    Article
  4. Association ofBalkan journal of medical genetics : BJMG · 2021
    Article
  5. Observational
  6. The Functional Polymorphism R129W in theGenetic testing and molecular biomarkers · 2019
    Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yu CaoYan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming Yan'an Hospital Kunming 650051, China.
Weixing LanLiuzhou Municipal Liutie Central Hospital Liuzhou 545007, China.
Yaxiong LiYan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming Yan'an Hospital Kunming 650051, China.
Chuanyu WeiYan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming Yan'an Hospital Kunming 650051, China.
Honglin ZouYan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming Yan'an Hospital Kunming 650051, China.
Lihong JiangYan'an Affiliated Hospital of Kunming Medical University, Kunming Medical University, Kunming Yan'an Hospital Kunming 650051, China.
Kunming Medical University · CNLiuzhou General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCongenital heart disease (CHD) is the most common birth abnormality, especially for sporadic CHD. However, the etiology of sporadic CHD is largely unknown. NKX2-5, the earliest sign of cardiac progenitor cell differentiation, plays a key role in cardiac morphogenesis, and the mutation of this gene can cause sporadic CHD. PURPOSE: To investigate the association of genetic variations of NKX2-5 with sporadic CHD in Chinese Bai people.

methodsThe whole 2 coding exons and flanking intron sequences of NKX2-5 gene were screened using DNA sequencing in 70 Chinese Bai patients with sporadic CHD and 136 healthy controls.

resultsA novel heterozygous DNA sequence variant (DSV), 1433A>G, was identified in one tetralogy of Fallot (TOF) patient and one persistent left superior vena cava (PLSVC) patient, but none in controls. The frequency of single nucleotide polymorphism (SNP) rs2277923 in CHD group was significantly higher than that in control group. The allele and genotype were associated with the occurrence of CHD.

conclusionThe novel DSV (1433A>G) may be relevant with TOF and PLSVC, and the SNP rs2277923 of NKX2-5 gene contributes to the risk of sporadic CHD in Chinese Bai people.

Indexed as

Polymorphism, Single NucleotideAdolescentAsian PeopleChildFemaleGenetic Predisposition to DiseaseGenotypeHeart Defects, CongenitalHomeobox Protein Nkx-2.5Homeodomain ProteinsHumansMaleReverse Transcriptase Polymerase Chain ReactionTranscription FactorsHomeobox Protein Nkx-2.5Homeodomain ProteinsNKX2-5 protein, humanTranscription FactorsChinese Bai peopleCongenital heart diseaseNKX2-5single nucleotide polymorphism

Identifiers

PMID26823822
PMCPMC4713608
OpenAlexW2420047487

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.